Gene Apar_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0954 
Symbol 
ID8413825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1074092 
End bp1074886 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content42% 
IMG OID645022542 
Productpeptidase C26 
Protein accessionYP_003179974 
Protein GI257784757 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.8221e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTATTC CAGATATTGT TAAAGATGCA TTTAGTGATG TTTCAAATCT TCCTGCTTCT 
GAGCGTCCTC TTATCTGCGT GACTCCTCGT TGGATGCCTG AAGAGAACTT TTCTGATTCT
GCTTCTGTAG GACAAATTCA GTTTGATGCC ATTCTTGCTG CAGGTGGCAT TCCAATCATG
ATGCCTTTAA CTGAAGATCC AGAGGTTATT GCTCAGTTTG TTGAGATATG TGATGGCTTT
TGTCTTACCG GTGGTCATGA TGTTGATCCA CGTAATTGGG GAGAAGAACC ACGTGACCTC
AACCGTTTAT CTCCTATGAG AGATGCGCTT GAGTTTGAGT TAGTAAAACA AGTGCTTGCT
GCAGATAAAC CATTACTTGC TATCTGTCGC GGTCTTCAGC TTTTAAATGT TGTACTTGGT
GGTACGCTTG CACAAGATTT GCACACGCTT GAACCAGCAG AAAATCATGT ATTTTGGACC
CATGCTGCAA ATCTGTATCA TCCAGCTCAT GCAGTTCATA TTCAAAAAGA TTCTTTGTTA
TATGAAACTT TGGGTAAGGT TGAAGACATC CAGGTAAATT CATACCATGA TGAGGCTTTA
CGAAAAGTAT CCTCTGAGCT CAATGTAGTT GCCTATGCCT CAGACGGCAT TATTGAAGGT
GCTGAGGTTA AGGGAAAGAC GTTTGCCTTA GGTGTACAGT GGCATCCAGA GTATGGATGG
CATTACAGCA AGGCTGACTG CGAACTTTGG AAATCCTTTG TTACAGCTTC ACAAGCTTCA
CGGTCTTCTC GTTAA
 
Protein sequence
MVIPDIVKDA FSDVSNLPAS ERPLICVTPR WMPEENFSDS ASVGQIQFDA ILAAGGIPIM 
MPLTEDPEVI AQFVEICDGF CLTGGHDVDP RNWGEEPRDL NRLSPMRDAL EFELVKQVLA
ADKPLLAICR GLQLLNVVLG GTLAQDLHTL EPAENHVFWT HAANLYHPAH AVHIQKDSLL
YETLGKVEDI QVNSYHDEAL RKVSSELNVV AYASDGIIEG AEVKGKTFAL GVQWHPEYGW
HYSKADCELW KSFVTASQAS RSSR