| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0953 |
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| Symbol | |
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| ID | 8413824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1072779 |
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| End bp | 1074029 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022541 |
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| Product | peptidase T |
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| Protein accession | YP_003179973 |
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| Protein GI | 257784756 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01882] peptidase T |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000027828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG TTTTAGATAG ATTTATTGCG TATTGCAAGG TTTCTTCTCA GTCCAATCCG
CTGACTGCAG ATACGGTTCC TTCAACTGAG TCTCAGCATC AGATGGCTGA GGTTGTTGCG
GCTGATCTTC GTGAGCTTGG TGCAGAAAAT GTAACAGTAG ATGAGCATGC TTATGTGGTT
GCTCACTGGC CTGCAAGTAA GGGTTTGGAA GATCTTCCTA CACTTGGTTT CTGTTGCCAT
ATTGATACTG CTTGGCAGTC TTGGGGCAAT CCCGTTCATC CTCAGGTAGT TACCTACGAG
GGCGGCAAGC TGGTGGTTGG TTCAGATCGC GAGGGTAGAG AGGTTTATAT TAGCCCCGAG
ACAAACCCTC AGCTTGAGCA TATGACTGGT TGGCAGCTTG TTACTACTGA CGGTACATCA
TTGCTTGGCG GTGATGACAA GGCTGGTATT GCCATGCTTG TTAGCTTGCT TGCTCGCTAC
AAGGAACATC CGGAGCTTAA GCATCCGCGC ATTGCACTTG CGTTTGTTCC TGATGAGGAG
ATTGGTCACG GTGCGGCCCT TCTGGATCTT GACGCCTTTG GTGCTGTTTA TGGCTACACC
ATTGACGGCG GTCCGTTTGG CGAGTTCTGT TACGAGACCT TCAATGCTGC TGAGGTGTTT
GTTTGCGCTC ATGGACTTTC GGTTCACACG GGAACCGCAA AAGGACAGAT GATTAATGCG
TCTGAGGCAA TCATGCGTTT TCATGAGTTG CTTCCACCTG CGGAGCGTCC TGAGTTCACA
GAAGGTTATG ACGGTTTTTT CTATCTGGAG CGCGTCAATG GTGATTGTGA GTCCGCACGT
GCTGATTACA TTATTCGTGA TCATGACCAG GCAAAAGTTG AGCGTCGTAA GCAGCTGATG
GTTGATGCTG CAGCATATGT AAACAAGCAG ATTGGCTCTG AGGTTCTCTC TGTTGAGATT
CATGATCAGT ATCACAACTT GGCTGATATT GTCTTGAAAC CTGAGTATGC GCACTTAATT
GAGAATGCGC GCATTGCATA CGAGAAGGCT GGTGTACAGA TGACCTGCAT TCCAATGCGC
GGTGGCACCG ATGGGTCTCA GCTCTCCTTT AGAGGATTTC CTTGCGCTAA TCTTTCGGCC
TGCTACTACA ACGCCCACGG CGTTAGAGAG TTTGTTCCTG TCCCAGAGCT TGAGGGTATG
GTTGACATGC TTGAGCACCT GGTAGAGCTT TACACTTATC CACAAAACTA G
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| Protein sequence | MSDVLDRFIA YCKVSSQSNP LTADTVPSTE SQHQMAEVVA ADLRELGAEN VTVDEHAYVV
AHWPASKGLE DLPTLGFCCH IDTAWQSWGN PVHPQVVTYE GGKLVVGSDR EGREVYISPE
TNPQLEHMTG WQLVTTDGTS LLGGDDKAGI AMLVSLLARY KEHPELKHPR IALAFVPDEE
IGHGAALLDL DAFGAVYGYT IDGGPFGEFC YETFNAAEVF VCAHGLSVHT GTAKGQMINA
SEAIMRFHEL LPPAERPEFT EGYDGFFYLE RVNGDCESAR ADYIIRDHDQ AKVERRKQLM
VDAAAYVNKQ IGSEVLSVEI HDQYHNLADI VLKPEYAHLI ENARIAYEKA GVQMTCIPMR
GGTDGSQLSF RGFPCANLSA CYYNAHGVRE FVPVPELEGM VDMLEHLVEL YTYPQN
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