| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0907 |
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| Symbol | |
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| ID | 8413774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1015936 |
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| End bp | 1017579 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645022491 |
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| Product | Thioredoxin-disulfide reductase |
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| Protein accession | YP_003179927 |
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| Protein GI | 257784710 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase
[COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase
[TIGR03143] putative alkyl hydroperoxide reductase F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000675051 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.496773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG TCAAAGACCT CTACGACGCG GTGATTATCG GCGGTGGGCC GGCAGGGCTC
ACCGCCGCCC TCTATCTGGC CCGTGCTCGC TACCGCGTTC TGGTTGTCGA GAAGGACCAT
TTTGGCGGAC AGATCACTAT CACTAATGAG GTTGTTAATT ATCCGGGAGT ATTCTCTACC
AGCGGCTCCG AGCTCTCTGA AACCATGCGC AAGCAGGCTG AGGCTTTTGG CGCAGAGTTT
TTGCTGGCAG AAGTCACCGA TCTGGATATG TCTGGAGATG TCAAGGTAGT TCACACTACT
AAGGGTGAGC GTCTCTGCCT TTCCGTTCTT CTTGCCACTG GAGCACATCC ACGACACATC
GGTTTTGTGG GAGAAGAGGA TTACCAGGGT CACGGCGTTG CGTACTGTGC TACCTGCGAC
GGCGAGTTCT TCACGGGCAA AGAAGTCTTT GTCATTGGTG GAGGCTTTGC AGCTGCGGAA
GAAAGCGTGT TTTTGACCAA GTACGCAAAG CATGTTACGG TTCTTGTGCG AGAAGAGGCA
TTTACCTGCG CTCCTGCATC ATCTGAGGCC GCTCGCACCA ATCCAAACAT TACGGTCCTG
TATAACACGC AGGTTGAGTC TGTTGCTGGA GATTCCGCGC TCAGGTCTAT TACGTACAAG
AATCTCAAGA CGGGCGAGAA GACCACCTTT GCGCCAGAGG ATGGCGATTC TATTGGCGTG
TTTGTCTTTG CGGGCTATGC ACCAGAGACC GATCTGGTAA AAGAACTGGC ACAGACTGAT
GATTACGGTT ATTTGATTAC CAACGAGCAT CAAGAAACAA CCTGTGAGGG TCTCTTTGGC
GCAGGTGATG TATGTCAAAA GCCGCTGCGT CAAGTTGCAA CGGCCATTGG CCAGGCAGCA
ACTACTGCTA CCGAGATGGA GCGCTATATC AAGCGCATTC AGGAAAAGAC CGGTCTAGTT
CCACAGATGA GCGTCACGCG CATCTCGTCT AAAAGGGAAG CTCCTGAAGC TCCAGCAGCC
AAGACTACCA CTGACCCCGG AGATCTTTTC ACTGATGACA TGAAGGTGCA GCTTAACGCT
GTCTTTGAGC GCATGGCACG TTCACTTGTG CTTCAGTTGG AGCTTGATCA AAGGCCTGTC
TCTGAAGAGC TTGTTGCGTA CATGGAGGAG CTTTCTTCTA TGACCGACAA GCTGAGCGTT
CAGACGGTCT CAGACACGGG CGAGAAAAAC CTTCCAGTTG TTCGTGTTTG CGCTCAAGAT
GGCACGCTAA CAGGTCTTGC GTTCCACGGA GTTCCTGGTG GCCATGAGTT TACTTCATTT
GTGCTGGGGC TTTACAACGC TGCAGGTCCT GGCCAGCCTA TCAGTGACGA GGATAAGGCA
TCCATTGCTG CAATTGAGTC AAAGACGCAT CTTCAGGTCT TAGTGGGACT CTCTTGTACC
ATGTGCCCAG ATGTTGTTGT AGCTGCTCAG CGCATTGCTG CGAACAATCC TCAGGTTACC
TGCGATGTCT ACGACATTAA TCACTTCAAG GAGCTCAAAG ATACCTACGA CGTCATGAGC
GTTCCTTGCT TGGTTATCAA CGACGGTCAG AAAGTTGACT TCGGTAAGAA GAACCTTTCT
CAGATTTTGT CGCTGATTCC TTAA
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| Protein sequence | MTDVKDLYDA VIIGGGPAGL TAALYLARAR YRVLVVEKDH FGGQITITNE VVNYPGVFST
SGSELSETMR KQAEAFGAEF LLAEVTDLDM SGDVKVVHTT KGERLCLSVL LATGAHPRHI
GFVGEEDYQG HGVAYCATCD GEFFTGKEVF VIGGGFAAAE ESVFLTKYAK HVTVLVREEA
FTCAPASSEA ARTNPNITVL YNTQVESVAG DSALRSITYK NLKTGEKTTF APEDGDSIGV
FVFAGYAPET DLVKELAQTD DYGYLITNEH QETTCEGLFG AGDVCQKPLR QVATAIGQAA
TTATEMERYI KRIQEKTGLV PQMSVTRISS KREAPEAPAA KTTTDPGDLF TDDMKVQLNA
VFERMARSLV LQLELDQRPV SEELVAYMEE LSSMTDKLSV QTVSDTGEKN LPVVRVCAQD
GTLTGLAFHG VPGGHEFTSF VLGLYNAAGP GQPISDEDKA SIAAIESKTH LQVLVGLSCT
MCPDVVVAAQ RIAANNPQVT CDVYDINHFK ELKDTYDVMS VPCLVINDGQ KVDFGKKNLS
QILSLIP
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