| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0886 |
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| Symbol | |
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| ID | 8413752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 988284 |
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| End bp | 988994 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022469 |
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| Product | Haloacid dehalogenase domain protein hydrolase |
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| Protein accession | YP_003179906 |
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| Protein GI | 257784689 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0500332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAA TGCAAAACGT AACTGCAACA AACAAATCAC TGGTAACTTC TGATGTAGTT
TCAGATTTGC AGAATCGCTC GCTTATTATT TTTGACTTCG ACGGAACCAT GGCAGACACA
TTGCCCACCA TTGTTTCTAC GGCAAAGATG GCAATGACTG ATTGTGGTCA TACAGACTTT
ATAGAATCAG ATCTCAAAAA GCTTGTAGGA CCACCCTTTC CTTATGCTTA TGAACTGGTT
TTTGGTCTGA GCCATGAGGA CGCCGTTGCG GTCACTAAGC GTTACCGAGA GCTCTATGTG
ACTACGGGAA GATGGCCTCT CTTTGAGGGT ATGAGGAGCC TCATTGACGA TCTTCATGCA
GCTGGCAAAA AGGTTGCTGT AGCAAGCTCA AAAAATTTGC CTATGCTTGA GATAGGTCTT
AAGGACAACA ATCTTATTGG TGTTCTTGAT GCTTATGCAG GAAGAATAGA TGAGGCTGCA
ACTGATAAAA TCACTGCCAT TGCTCACGTC ATGCGCCAGC TTGGCTTTGA TGCTTCTGAA
AGCGTAATGG TAGGGGATCG CTGTTTTGAT ATGGAAGCTG CATTTCCAAA TCAGATTCCG
TGTATTGGTG TGTTGTATGG AAAAACCACC AATAGACAGG AGCTTATTGA TGCGGGTGCG
GTTGCAATTG TAGATACGGT AGAAGATCTA CACCACGTTC TTCTCGCTTA A
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| Protein sequence | MTVMQNVTAT NKSLVTSDVV SDLQNRSLII FDFDGTMADT LPTIVSTAKM AMTDCGHTDF
IESDLKKLVG PPFPYAYELV FGLSHEDAVA VTKRYRELYV TTGRWPLFEG MRSLIDDLHA
AGKKVAVASS KNLPMLEIGL KDNNLIGVLD AYAGRIDEAA TDKITAIAHV MRQLGFDASE
SVMVGDRCFD MEAAFPNQIP CIGVLYGKTT NRQELIDAGA VAIVDTVEDL HHVLLA
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