| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0876 |
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| Symbol | |
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| ID | 8413742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 976195 |
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| End bp | 976467 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022459 |
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| Product | Phosphotransferase system, phosphocarrier protein HPr |
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| Protein accession | YP_003179896 |
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| Protein GI | 257784679 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.45631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.298141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTTCAA AGCAGACTAC AATCATCAAT GCAACTGGTC TTCATGCTCG TCCTGCATCC
GTCTTTGTTT CTGAGGCAAA GAAGTTTGAG AGCAATGTCA CCATCAAGAA TGTTGACAAG
GACTCCGCAC CAGTTAATGC TAAGTCCATC ATGATGATTC TTGCTGCTGG TCTGGGTACT
GGCACCAAGA TTGAGATTGC ATGTGACGGC GCTGACGAGC AGGCAGCTCT TGACGCTCTT
ATCGCTCTTG TTGATAGCGG TTTTGGCGAG TAG
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| Protein sequence | MVSKQTTIIN ATGLHARPAS VFVSEAKKFE SNVTIKNVDK DSAPVNAKSI MMILAAGLGT
GTKIEIACDG ADEQAALDAL IALVDSGFGE
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