| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0864 |
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| Symbol | |
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| ID | 8413730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 958827 |
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| End bp | 960191 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022447 |
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| Product | thiamine pyrophosphokinase |
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| Protein accession | YP_003179884 |
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| Protein GI | 257784667 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase
[COG1564] Thiamine pyrophosphokinase |
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| TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000134495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.492449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTGA CCGGTGCAAT TTTTGATTGC GATGGAACCC TCGTTGATTC AATGTGTGTT
TGGCACAATG TGTTTAGTGC TGTTCTTCCT AAATATGGCA AGACCGTTGA TCCAGACATT
TTTAATCGCG TAGAGGCAGT TTCACTCATT GGTGGATGTC AGATTTGTGT TGATGAACTT
GCTTTGCCTG TCACAGCAGA AACCTTGTAT GAAGAGTTTT GCGCGTACGC AACTGACCAG
TATCAACATC ACGTTTCAAT CGTTCCCGGC GCAAAGGAGT TCTTGCAGGA ACTCTACGAT
GCGGGTATTC CTCTGGCTGT TGCATCATCA ACCCCCGTGC GAGAAGTACG TGCAGCCCTT
GCAGCTCAAG GTATTGAACA TCTCTTTAAA ACGGTAGTTT CAACGGAGGA TGTTGGGGGA
GTGGACAAGG TTGAACCAGA TGTTTACCTT GAAGCTCTCC GTCGTCTCGG CACCGATAAA
GCGACAACCT GGGTTTTTGA GGACGCTCCG TTTGGTGCTC AGACGGCTCA AAAAGCAGGT
TTCCCCGTGG TGGCACTTTA TAACGATCAT GACGGTAGAG ATCCCGTCTT TATGAGAGAA
CACTCTAATA TCTTTGCCCA CACTTACGGC GAGTTGTCGC TTCTGCGTCT TTGTGACTAC
GAGCGTCCTC TGACCAGTGC TCCTTCTGGC GAGAAGCCCC TTGAGGTTCT TATTGTGGGC
GGATCCCCAG AGGCTGTCTC AAAAACGACG CTTTCTACCT GTGTCCAAAG CGCTGATTAC
CTGATAGCGG TTGACCACGG TGCAGATGCA TGTCACGTTG CCGGTGTGGT TCCACAGCTT
GCGCTTGGAG ACTTTGACTC AGCTTCATTA GAAACGGTGA CTTGGCTCAA AGAACAGCAG
GTACCTTGTA TGAAGTTCAA TGCGGATAAA TATGATACCG ACCTTGCTCT TGCTCTTAAG
TCCGCTGAGC ACGAGGCAAT TCGCAGAAAT AGTAAACTCT CACTCACGGT CGTCTCTACG
TCTGGTGGCC ATCTGGATCA TCAGCTTGTA GTGCTCGGTC TTCTTGCCGC GTGGGCAAAG
ACGGGCAAGG CAAAGGTTCG TGTTGTTGAG AATGATTTTG AGATGCGCTT TTTAGCCGCG
GATCAAATTG ATTCTTGGCA GCTTGATGCA TCTGCAACAG GTAAAAAGAT TTCTCTTGTT
GCTTTGTCAG AGGAGTGCGA GGTTTCTGAG TCTGGCATGA GGTGGAATCT TAATCACGAG
AAGTTCACCT TACTTGGAGA TGACGGAATC TCAAATATTG TTGAAGCTGA CGGGGCTTGG
GTCAAGTGCG AGAAGGGCTG TCTTTTGGTG CAGCTTTGGA ATTAA
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| Protein sequence | MQVTGAIFDC DGTLVDSMCV WHNVFSAVLP KYGKTVDPDI FNRVEAVSLI GGCQICVDEL
ALPVTAETLY EEFCAYATDQ YQHHVSIVPG AKEFLQELYD AGIPLAVASS TPVREVRAAL
AAQGIEHLFK TVVSTEDVGG VDKVEPDVYL EALRRLGTDK ATTWVFEDAP FGAQTAQKAG
FPVVALYNDH DGRDPVFMRE HSNIFAHTYG ELSLLRLCDY ERPLTSAPSG EKPLEVLIVG
GSPEAVSKTT LSTCVQSADY LIAVDHGADA CHVAGVVPQL ALGDFDSASL ETVTWLKEQQ
VPCMKFNADK YDTDLALALK SAEHEAIRRN SKLSLTVVST SGGHLDHQLV VLGLLAAWAK
TGKAKVRVVE NDFEMRFLAA DQIDSWQLDA SATGKKISLV ALSEECEVSE SGMRWNLNHE
KFTLLGDDGI SNIVEADGAW VKCEKGCLLV QLWN
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