| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0854 |
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| Symbol | |
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| ID | 8413720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 950231 |
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| End bp | 951214 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022437 |
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| Product | fatty acid/phospholipid synthesis protein PlsX |
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| Protein accession | YP_003179874 |
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| Protein GI | 257784657 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTTA TTTGTGTAGA TGTTATGGGA TCAGACCAAA GTCCTGAGGT TGTTCTTGAG
GGAGTTCGTA TGGCTCTTCA GAAGGATCAA GAGCTAGAGG TTCTTCTCGC CGGAGCTGAT
GAATTTGTTA CTCCTTTTGC AAAAAAGCAT GATCGTGCAA AGACTTTGGT AACTACTGAA
GTTATTGCTA TGAGTGAGCA CCCCGCTAAT GCGGTAAGAC AGAAGAAAGA CGCCAGTATC
GTAAGAGCTG CCCAGGCAGT TAAGGCAGGG GAGGCCGATG GTCTTTTCTC AGCAGGATCT
ACAGGCGCGG TGCTTACGGC AGCTACCTTT GGTATTGGTC GTATTAAAGG CGTAAAGCGT
CCAGCGCTCA CGCTAATTTT TCCTGGACTC GGCGGTCATA GAACGGTCTT TTTGGACACT
GGTGCTAACG CTGATGTGCG TCCAGAGGTT TTGGTTCAAT TTGCACAAAT GGGTAAGGCC
TTTGCAAACG CGTCATTGGG AATTGAAAAT CCAACCATAG GACTTCTCTG CAATGGCTCT
GAAGAGACCA AAGGTTCTGA GCTTGCTCTT TCATATCACG CGGCTTTAGC AGAAGCAGCT
ATTAATTTTG GTGGAAATGC TGAAGGAACG GATATTTTAG GAAGCCGTTT TGATGTTATT
GTGACAGATG GCTTCACTGG AAATGTGGCC TTAAAATCTA TTGAGAGCAC GGGCAAATTT
ATTATGTCCA GCCTCAAGGA TGCGATTAAT TCTTCCAAGA AGGCTGCTTT TGGTGCACTC
CTTTTGAAGG ATGCTCTTAA GGCTACTGCT GCGGAACTTT CGGGAGATTC TGTTGGCGGT
GCTTTTTTGC TGGGCGTTTC GGCTCCTGTG CTTAAAGGAC ATGGTGCTAC CAGCTCTTCT
GCGGTGTGCG CAGGAACACT CTCTGCGGCT AATGCAGTAC GTGCCAACCT TGTTGAGAAA
ATCTCCTCTT CAATTCAGCT GTAG
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| Protein sequence | MPVICVDVMG SDQSPEVVLE GVRMALQKDQ ELEVLLAGAD EFVTPFAKKH DRAKTLVTTE
VIAMSEHPAN AVRQKKDASI VRAAQAVKAG EADGLFSAGS TGAVLTAATF GIGRIKGVKR
PALTLIFPGL GGHRTVFLDT GANADVRPEV LVQFAQMGKA FANASLGIEN PTIGLLCNGS
EETKGSELAL SYHAALAEAA INFGGNAEGT DILGSRFDVI VTDGFTGNVA LKSIESTGKF
IMSSLKDAIN SSKKAAFGAL LLKDALKATA AELSGDSVGG AFLLGVSAPV LKGHGATSSS
AVCAGTLSAA NAVRANLVEK ISSSIQL
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