| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0814 |
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| Symbol | |
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| ID | 8413679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 895499 |
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| End bp | 896434 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022396 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_003179834 |
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| Protein GI | 257784617 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0244425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.140169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCAG TTAAACATTT GATTGATACG AACAGCCTGA CTCATGATGA TATCCAGCAG
ATTCTTGATA CCGCTCAGTC ATTTGAGGCT GTGAACAACA GAGACATCAA AAAAGTGCCA
GCACTTCGTG GTCGTACCAT CGTAAATCTT TTTTTGGAAC CTTCTACCAG GACTCGTTCC
TCATTTGAAC TTGCCGAGAA GCGCCTCTCT GCTGATGCTC TAAATATGGG AGGCTCAACT
TCATCTGTTG TTAAGGGTGA ATCGCTGGCA GATACTATTC AGACTATCGA CGCCATGAAC
GTTGATATGT TCATCTGTCG TGCAAGACTT GCAGGAACAC CACAGAAGAT TACTGAGAAC
ACTGATGCAG TGGTTATAAA CGCGGGTGAC GGTAAGCATC AGCACCCAAC TCAGGCAATG
CTTGACCTCT ATACTATCCG CAAAAACTTT GGACATCTTG ACGGTCTTAA GGTTGCTATT
GTCGGCGATC TTTCTCACAG TCGCGTTGTT GGTTCTTTGG TGCCAGCACT TAAAACTATG
GGGGCAGAGG TGGTTTTGGT TGGTCCTCCA ACATTCCACG TAGATGATCC AAGTTGGTTT
GATTGTTATC AGACTTCGCA CTTTGATGAA GTCATTGGAG ATGTAGACGT TGTGTATATG
CTTCGTGTGC AGCTGGAGCG TATGGAAGGA GCTCCTATTC CTTCTCGCCG TGAGTATAAC
AGGCTTTGGG GTCTTGATGA GCGCCGCAGT AAGCTGATGA AGCCCGAGGC AATTATTTGC
CACCCAGGTC CTATGAACCG TGGCATGGAA ATTAACAGCG AGGTGGCTGA TTGTGTTCGC
TCTCGTATTC TTGACCAGGT CAATGCAGGC GTTTTAACGC GCATGGCCGA AATGTATTTG
CTTCTGGGAG GAGACTTTGA TGGCATTTCT GCTTAA
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| Protein sequence | MLSVKHLIDT NSLTHDDIQQ ILDTAQSFEA VNNRDIKKVP ALRGRTIVNL FLEPSTRTRS
SFELAEKRLS ADALNMGGST SSVVKGESLA DTIQTIDAMN VDMFICRARL AGTPQKITEN
TDAVVINAGD GKHQHPTQAM LDLYTIRKNF GHLDGLKVAI VGDLSHSRVV GSLVPALKTM
GAEVVLVGPP TFHVDDPSWF DCYQTSHFDE VIGDVDVVYM LRVQLERMEG APIPSRREYN
RLWGLDERRS KLMKPEAIIC HPGPMNRGME INSEVADCVR SRILDQVNAG VLTRMAEMYL
LLGGDFDGIS A
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