| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0810 |
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| Symbol | |
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| ID | 8413675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 891769 |
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| End bp | 892500 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022392 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_003179830 |
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| Protein GI | 257784613 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0110455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.701871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAACAG ACGAGCAGGC ACGCGACGCC GTTATTGTTG CGCTTGATTG CACAAGAGAA
AGAGCTTTGG AGCTCACCGA TCTTCTCGCC GGTCATGCAC GTTGGGTCAA GGTTGGCATG
ACACTGTTTT ATCGCTATGG ACCTTCGATG GTGGACGAGA TGCATGCTCG TGGGTTCAAG
GTGTTTTTAG ATCTTAAGGT GCACGATATT CCATTCCAGG TTAAAGGTGC TGTCCATTCT
GCATCTCTTT CTGGTGCAGA CATCCTTTCT ATTCATGGTC TGGGTACAGC ACAGATGATC
TCAGCTGGTC GTGAGGGCGC AGAAGAGGCT GCAGCAGAGC GTGGTGTTGA TGAGTCTGGT
CGCACCAAGC TGGTGGCTAT TTCTGTACTT ACGAGTATGG ATGAGAAGGC ACTTCATTCC
ATTGGCGTTG ACGGCTCAAT TAAGGATGAG GTTGCCCGTT TGGCTTCTCT TTCTTACAAC
GCTGGCGCTG ACGGAATCGT TTGTTCACCC CAGGAGGCAC AGGAAATGAG AGAGCTTTTG
GGACCAAATG CACTCATTGT GACTCCAGGA GTACGTCCAG AAGGTGCCGA GAAGGGCGAT
CAAGTCAGAA TTTCCACACC TTCAGCTGCA ATTAAGGCTG GAGCAAGCAA ATTGGTAGTT
GGCAGGCCAA TTACCTGCGC AAACGATCCA GTTATTGCAT TTGAAGCCAT CATTTCTGAA
CTAAAAAATT AA
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| Protein sequence | MLTDEQARDA VIVALDCTRE RALELTDLLA GHARWVKVGM TLFYRYGPSM VDEMHARGFK
VFLDLKVHDI PFQVKGAVHS ASLSGADILS IHGLGTAQMI SAGREGAEEA AAERGVDESG
RTKLVAISVL TSMDEKALHS IGVDGSIKDE VARLASLSYN AGADGIVCSP QEAQEMRELL
GPNALIVTPG VRPEGAEKGD QVRISTPSAA IKAGASKLVV GRPITCANDP VIAFEAIISE
LKN
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