| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0806 |
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| Symbol | |
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| ID | 8413671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 889185 |
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| End bp | 890429 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022388 |
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| Product | thiamine biosynthesis/tRNA modification protein ThiI |
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| Protein accession | YP_003179826 |
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| Protein GI | 257784609 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
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| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.305799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA GAGTATGTCT GGTTCACTAC CATGAAATTG GTTTAAAGGG TAAGAACCGA
TCCACTTTTG AAAATCAGTT GGTAACAAAT TTACGACGAG CCCTCCGACA CTTTCCAGTG
GCGGGGGTTT CTCGCATTTC TGGCTACCTT CTTGTAGAAA CCACCGATAA ACAAGCAACT
GAAGAACTGC AACGTGCAGT AGCTCAGGTT CCTGGTGTTG CTCGCGCTTC TTTAGCATAT
CGTTGTGGCT TGGATGAGCA GGAGTTTTGT AACGCCGCTG TGAAGGCGCT GGGGGAGGCT
GGCAACTTTA CTACGTTTAA AGTGCATGCT CGCCGTTCCT CAACAGTCTA TCCAAGGCAT
TCCATTGAGC TTAATCAACT TGTTGGTGCA GTACTTTGTG AGAATTTTCC TGATAAAAAA
GTTCAGATGC ATGATCCTGA TATGACGGTG TATGTACATG TTGTTCAGGG CAACGCTTAC
GTATATGCTG CGTCTATTCG CGGTGTTGGG GGTCTTCCTG TTGGAACTGC AGGTAAGGTT
GTATCACTTC TTTCAAGTGG TATAGATTCG CCTGTTGCAA CATGGATGGT TGGTCGTAGA
GGTGCTACGG TAATTCCAGT TCACTTCTCT GGTCGTCCTA TGACTTCTGA TACAAGCGAA
TACCTGTGTC AGGATATTAT TGAGGCACTT GAGTCCGCTG GCCTTATTGG CAGAATGTAT
GTTGTGCCAT TTGGTGAGCA TCAGCGTGAG ATTTCCCTTG CGGTTCCACA AGCTCTCCGT
ATCATTATGT ATCGTCGCGT GATGTATATC ATTGCACAGA AGATTGCAGA GCTTGAGGGT
GCTAAAGCAC TGGTAACGGG AGAGTCACTT GGTCAAGTTG CTTCTCAGAC TCTCGACAAC
ATTGCTGCTG TCAACGAGGC TGTTACCATA CCTGTTTTGA GACCTCTGAT TGGCTCTGAT
AAGCAAGAAA TTATTCGTCG CGCCCAAGAT ATCAATACAT TTGATATTTC AACGCAGACG
GCTCCTGATT GCTGCACACT GTTTATGCCT CGTCGTCCTG AGACTCATGC AAGGATACGA
GAAGTTCTTG AGGCATGGAA TTCTTTTAAT CATGATGAAA TGATTGAAAA TCTTATGCAG
CATATTGAGT ATATTGACTT TAACCAGTGT CCTTCATATA AGCCACCTAA AGTATTGCCT
GCTCGTCATA AAGAGCTTGC TCCTGCTGAA TTTGTTACTG ATTAG
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| Protein sequence | MTERVCLVHY HEIGLKGKNR STFENQLVTN LRRALRHFPV AGVSRISGYL LVETTDKQAT
EELQRAVAQV PGVARASLAY RCGLDEQEFC NAAVKALGEA GNFTTFKVHA RRSSTVYPRH
SIELNQLVGA VLCENFPDKK VQMHDPDMTV YVHVVQGNAY VYAASIRGVG GLPVGTAGKV
VSLLSSGIDS PVATWMVGRR GATVIPVHFS GRPMTSDTSE YLCQDIIEAL ESAGLIGRMY
VVPFGEHQRE ISLAVPQALR IIMYRRVMYI IAQKIAELEG AKALVTGESL GQVASQTLDN
IAAVNEAVTI PVLRPLIGSD KQEIIRRAQD INTFDISTQT APDCCTLFMP RRPETHARIR
EVLEAWNSFN HDEMIENLMQ HIEYIDFNQC PSYKPPKVLP ARHKELAPAE FVTD
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