| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0795 |
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| Symbol | |
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| ID | 8413660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 875721 |
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| End bp | 876992 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022377 |
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| Product | RNA modification enzyme, MiaB family |
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| Protein accession | YP_003179815 |
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| Protein GI | 257784598 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.134555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.773593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCATG GTATTGCACT TATAAATCTT GGATGCAGAG TTAATCGAGT TGAGCTTGAT
TTAATGGCAG AGTCTTTGCT TCGTATGGGT TGCCATATTG TTGAAGAAGA TGAAGCACAG
GCAATTGTTA TTAATACCTG TGCAGTTACT GCTGAAGCAG AAGCTAAGAC GAGAAAAGCT
GTGCGTAAAG CAGCGCTTAT GCCTGGAGCT CCTCTTGTGG TGGCAACTGG TTGCGTTGCA
AGTCTTTTTG CTGAAGAGCT TGCTTCGCTT GCCCCAAATG TTGTTGTAGA AGCCGAGAAG
GACAAAGTTG CAGATAGAGT TCTTGAAGAG CTTGGTTTTG CTCCTGAATC AGTAAGTGAT
GATGGTCTTG TTATTTCAAA GCCAACACCT ACTGGTCGTA CGCGTCCCGG TATCAAAATT
CAAGATGGCT GTGATAATCG ATGCACCTTC TGTATTGTGT GGAAAGCACG TGGTGCAGGA
AAGTCTCTTG ATCCTCGTAA AGTTGTTTCA CAGGTAAAAG ACGCTATGAG CAGAGGTGCT
CAGGAGGTTG TTCTTACAGG AATTAATCTT GGTAGTTATA AAGTTCAACT TGAAGATGAG
GGTGAGAAAA TCTTCAGGCT CCCAGATCTT CTCGAGTATG TGCTTGAAAA AACTGAGGTT
GGACGCCTAA GACTTTCTTC TCTTGAGCCA CCTGATGTAA ATGCACGCCT AGTGAAGGTA
ATTGCTGCAT CCAACGGAAG AGTTGCACCA TTCTTACACA TTTGTCTTCA GTCTGGATGT
GACGCAACGC TTGCCCGTAT GGGCAGGGTA TATAGGACAG AGCTCTATCG CAAGGCTGTT
GAGGAAGCGC GTTCAGAGCT GTCAACCATC GCATTAGGAA CAGACCTCAT TGTTGGTTTT
CCAGGAGAAA CCGATAAAGA ATTTGAAGAG TCATATGAGT TTTGTCGTCA GATGGGCTTT
TCAAAAATGC ATGTATTTAG ATATTCCAAA CGTCCTGGAA CGCCTGCAGC CACTGCTCCA
AATCAGGTTA ATCCAAAGGT GATGGCCGAG CGTGCAAAGA AAATGCGTGA TTTGGGTAAT
AAAATGCGTT TTGATGCTGC CAAGAAGCTT ATTGGTACCT GCGATAATGT GGTGGTACAG
TATCCAGGTA AAGGAATTTC TGGAGGTCTT TTTGACGTTC AGGTTGACCC TACCATTGAA
CTTGATGAGT TAGTTGCTAT GCGCTTTGAT GAAGTTTTAC CTAATGGAAC ACTAAAAGCT
ACTCGTTTAT AA
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| Protein sequence | MAHGIALINL GCRVNRVELD LMAESLLRMG CHIVEEDEAQ AIVINTCAVT AEAEAKTRKA
VRKAALMPGA PLVVATGCVA SLFAEELASL APNVVVEAEK DKVADRVLEE LGFAPESVSD
DGLVISKPTP TGRTRPGIKI QDGCDNRCTF CIVWKARGAG KSLDPRKVVS QVKDAMSRGA
QEVVLTGINL GSYKVQLEDE GEKIFRLPDL LEYVLEKTEV GRLRLSSLEP PDVNARLVKV
IAASNGRVAP FLHICLQSGC DATLARMGRV YRTELYRKAV EEARSELSTI ALGTDLIVGF
PGETDKEFEE SYEFCRQMGF SKMHVFRYSK RPGTPAATAP NQVNPKVMAE RAKKMRDLGN
KMRFDAAKKL IGTCDNVVVQ YPGKGISGGL FDVQVDPTIE LDELVAMRFD EVLPNGTLKA
TRL
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