Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0790 |
Symbol | |
ID | 8413655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 872159 |
End bp | 872908 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645022372 |
Product | DNA repair protein RecO |
Protein accession | YP_003179810 |
Protein GI | 257784593 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000558246 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.055878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGGTA GAAAGACCAC TCGTCTTAAA GCAATTGTGC TTGATAGAAC AAAACTTGCC GAGCAAGACC TCATCTTGAC CATGCTTTCC GATACGGGAG AAGAACGCCG AGCTGTTGCA AAGGGCGCCC GAAAGCCGGG AGGTCGTTTT GCTGCTCGCG TTGAACTCTT CTGCGAACTA GACGTGCTGC TGGCAGAGGG ACGCTCACTT GATATCTTGT CTGAGGCAAC CTTGCTTGAA CCGCACGCAA CGCTTCGCGG AGATCTTTCT AAAGTAGCTG CTGCATCTGC TATCTGCGAA GTGGCGCGAT TTTCGTGTAT TGACGGCGTC GAGGATGCGT TTCTCTTCTC GCTGCTTTCA CGTGCGCTTA AAGCCTGCGA AGAAGTGGAT GACGAGAAAC ACTTAGATCT TGTAGTTGCC GCCTATGTGT TTAAGGTTTT AGCACACGAA GGCTGGCGCC CAGAGCTGGC ATCGTGCATT GCCTGTGGAG ATGAGGCTTT GACGTACTTC TCGCCAACTG CTGGTGGTGC TTTATGTGGA AGTTGTGCGC ATGAGATTGA GGGGGCTATT GAGGTGACTC AGCTTGAACT CTCGTGGTTG TCGTCGCTTC TAAAACTTAC CTTTGACCAG CTGGTTGTTG CAGAAATTGC TCCAGAAACT GCGCTCTTTT TGCTCACAAG CGCGCATATT TGGGCGGCTA CGCACCTTGA AGTGCGTCTT AAAGCATTTG AATTTTTGCT CAGTATCTAG
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Protein sequence | MPGRKTTRLK AIVLDRTKLA EQDLILTMLS DTGEERRAVA KGARKPGGRF AARVELFCEL DVLLAEGRSL DILSEATLLE PHATLRGDLS KVAAASAICE VARFSCIDGV EDAFLFSLLS RALKACEEVD DEKHLDLVVA AYVFKVLAHE GWRPELASCI ACGDEALTYF SPTAGGALCG SCAHEIEGAI EVTQLELSWL SSLLKLTFDQ LVVAEIAPET ALFLLTSAHI WAATHLEVRL KAFEFLLSI
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