Gene Apar_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0782 
Symbol 
ID8413647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp860998 
End bp861609 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content41% 
IMG OID645022364 
ProductCDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_003179802 
Protein GI257784585 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000924748 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0541289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAA AGACAATTTG GACACCTGCA AATATTGTTA CCTGTGCTCG AGTAGTCCTG 
GTACCCTTTT GGCTTCTCCT TGCACAGCTT TTAGGCGTAT CTCTGGTGGA TTCTCTGTCA
ACACCTGGTT TTAAACTTGG AGCTTTTCTT GTCTTTATCG TCTATGTTGT CATTTCTTTG
ACCGATAAGC TTGATGGTTA CCTTGCACGT AGTAGAAATG AAGTCACCAC CTTTGGTAAG
TTCTTAGATC CAATTGCCGA TAAACTCGCT GTTGTTGTAG CGCTTTTTGT ACTTCTGGAG
TGGCATATGG TTTCTCCATG GGTACTCTTA GTGATTGTTG CACGAGAGTT TTTGGTATCG
GGTCTTAGAA TGGTTGTTGC TTCAAAGGGT GTTGTTATTG CGGCATCTAG CTTGGGAAAG
TGGAAAACTG CAACAACTAT GGTTGCTATC TGTGGCCTGC TTTTCTTGCC TAGTATTCCC
GGTGGAATGA TTCAGGATGT TTTTGTTTTG TTCTCTATCT TTAATACATT TATGTGGGTT
GCGGTAGTTC TTACTGCTTG GTCAGGAATT GACTACTTTG TAAAGTCTTG GCAATACATT
GCTGAAGTTT AA
 
Protein sequence
MSSKTIWTPA NIVTCARVVL VPFWLLLAQL LGVSLVDSLS TPGFKLGAFL VFIVYVVISL 
TDKLDGYLAR SRNEVTTFGK FLDPIADKLA VVVALFVLLE WHMVSPWVLL VIVAREFLVS
GLRMVVASKG VVIAASSLGK WKTATTMVAI CGLLFLPSIP GGMIQDVFVL FSIFNTFMWV
AVVLTAWSGI DYFVKSWQYI AEV