Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0782 |
Symbol | |
ID | 8413647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 860998 |
End bp | 861609 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 645022364 |
Product | CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | YP_003179802 |
Protein GI | 257784585 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000924748 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0541289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCAA AGACAATTTG GACACCTGCA AATATTGTTA CCTGTGCTCG AGTAGTCCTG GTACCCTTTT GGCTTCTCCT TGCACAGCTT TTAGGCGTAT CTCTGGTGGA TTCTCTGTCA ACACCTGGTT TTAAACTTGG AGCTTTTCTT GTCTTTATCG TCTATGTTGT CATTTCTTTG ACCGATAAGC TTGATGGTTA CCTTGCACGT AGTAGAAATG AAGTCACCAC CTTTGGTAAG TTCTTAGATC CAATTGCCGA TAAACTCGCT GTTGTTGTAG CGCTTTTTGT ACTTCTGGAG TGGCATATGG TTTCTCCATG GGTACTCTTA GTGATTGTTG CACGAGAGTT TTTGGTATCG GGTCTTAGAA TGGTTGTTGC TTCAAAGGGT GTTGTTATTG CGGCATCTAG CTTGGGAAAG TGGAAAACTG CAACAACTAT GGTTGCTATC TGTGGCCTGC TTTTCTTGCC TAGTATTCCC GGTGGAATGA TTCAGGATGT TTTTGTTTTG TTCTCTATCT TTAATACATT TATGTGGGTT GCGGTAGTTC TTACTGCTTG GTCAGGAATT GACTACTTTG TAAAGTCTTG GCAATACATT GCTGAAGTTT AA
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Protein sequence | MSSKTIWTPA NIVTCARVVL VPFWLLLAQL LGVSLVDSLS TPGFKLGAFL VFIVYVVISL TDKLDGYLAR SRNEVTTFGK FLDPIADKLA VVVALFVLLE WHMVSPWVLL VIVAREFLVS GLRMVVASKG VVIAASSLGK WKTATTMVAI CGLLFLPSIP GGMIQDVFVL FSIFNTFMWV AVVLTAWSGI DYFVKSWQYI AEV
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