| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0774 |
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| Symbol | |
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| ID | 8413639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 853766 |
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| End bp | 855133 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022356 |
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| Product | RNA modification enzyme, MiaB family |
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| Protein accession | YP_003179794 |
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| Protein GI | 257784577 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0255462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.23064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAA ATTCCGAGCT CGTAGGAAAA ACATATCACA TTAAAACTTT TGGCTGCCAG
ATGAACCTTC ACGATACAGA ACGTGTTTCT GGTCTGCTTG AGGCTTGCGG CTGTAATGAG
GTTTCAGATA CCGATGACGC TGATATTGTC ATTTTCATGA CCTGTAGCGT TCGTGAGAAC
GCTGATCAGC GACTCTACGG ACAGGCTTCT GCAATGGTCA GTGCTCCAAC GCCTCCATCC
GGCAAGCGTA TTGTTGCTAT TGGTGGTTGC ATTGCGCAGC GCGATGGTGA GAAGCTCCGC
GAAAAGGTCC CAGCTGTTGA CGTTGTGTTT GGTACCAGTG CGCTTGCAAG TTTGCCAGCA
CTTCTCACCA GCGCATTTAG GGGCGAGAAT GACCGTGTGG CCGTAGATAT TTCTGAGGAG
GGCAAAGGCT TCTCCACAGA CCTGCCAAGT AACCGCGCTC AGCAGTATCA TGCTTGGGTG
CCTATTATGA CCGGCTGCAA CAATTTTTGC ACGTATTGCA TTGTTCCTTA CGTTCGTGGT
CGTGAGCGCA GCCGAACCTT TGAGGCCGTC ATTGGTGAAT GCGAGCGTCT TGTTGCGGAT
GGCGTTCGTG AGATTACTCT TCTTGGTCAA AACGTTAACT CTTATGGCCG TGACCTCTAT
GGCAAGCCTC GTTTTGCAGA GCTTTTACGC GCTGTTGGTC AGACGGGTGT TGAGCGTATT
CGTTTTACCT CGTCAAATCC AAAAGACCTT ACTGATGAGA CTATTGCAGC TATGAAGGAA
ACACCAGCTG TCATGCCTCA TCTTCATCTT GCGGTTCAAA GCGGATCTAC GCGTGTTCTC
AAGAAGATGA ACCGCAGCTA TACGCGAGAA GAGTATCTTG ATGTAGTTTC TCGTCTTCGC
GCGGCTATTC CAGGACTAGC GCTTTCAACT GATATTATTG TTGGCTTCCC AGGAGAGACT
GAAGAAGACT TTGAGGAAAC GCTTTCTTTG GTCAAAGAAG CCGGTTACTC TTCTGCGTAC
ACCTTTATTT ACTCTAAGCG TCCAGGAACT CCTGCAGCAA AATATGAGGA CAATACGCCT
CATGAGGTCA TCCAAGAGCG CTTTGACAGA CTTGCAGAGC TCGTTGCTCA GCAGGCACAT
GAAGCTAACC AGGTAGATCT GAATACTACA CAGGCAGTTC TTGTTGAGGG AACTTCTAAA
CGTGACGATA CCGTTATGGT GGGACATAGC GAGAAGAACC AAACAGTTCA CTTCAATTTG
CCAGAAGGCT ACACGTCAAA AGACCTTATC GGAAAAATTG TTGATGTCCA TATTGATGAG
GCTCGTACTT GGTACCTGCG TGGAACCATG GAGTCTGATC CACGATGA
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| Protein sequence | MIENSELVGK TYHIKTFGCQ MNLHDTERVS GLLEACGCNE VSDTDDADIV IFMTCSVREN
ADQRLYGQAS AMVSAPTPPS GKRIVAIGGC IAQRDGEKLR EKVPAVDVVF GTSALASLPA
LLTSAFRGEN DRVAVDISEE GKGFSTDLPS NRAQQYHAWV PIMTGCNNFC TYCIVPYVRG
RERSRTFEAV IGECERLVAD GVREITLLGQ NVNSYGRDLY GKPRFAELLR AVGQTGVERI
RFTSSNPKDL TDETIAAMKE TPAVMPHLHL AVQSGSTRVL KKMNRSYTRE EYLDVVSRLR
AAIPGLALST DIIVGFPGET EEDFEETLSL VKEAGYSSAY TFIYSKRPGT PAAKYEDNTP
HEVIQERFDR LAELVAQQAH EANQVDLNTT QAVLVEGTSK RDDTVMVGHS EKNQTVHFNL
PEGYTSKDLI GKIVDVHIDE ARTWYLRGTM ESDPR
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