| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0773 |
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| Symbol | |
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| ID | 8413638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 852831 |
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| End bp | 853769 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022355 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_003179793 |
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| Protein GI | 257784576 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0435876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.318926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTCTC ATGGCTCAGT TATCTGCATT GTAGGTCCTA CGGCTTCGGG CAAAAGCTCC
TTGTCTGAGC TGGTAGCTAA GCAGCTTGAG ACTTCTGTCA TTTCTGTTGA CGCAATGCAG
ATCTACTGTG GCATGAATAT CGGTACTGCT AAAACTCCTA TTGAGGAGCG AGAAGTTCCT
CTTCTGATGG TAGATTGTGC CAACATCTCA GAAGAATACT CTGTTCAGAT GTTTCAGATG
GCAGCTCGCG CAGAAGCTCA TAAGCTCATT GATGCTGGTA AAACCCCCGT ATTTTGTGGT
GGAACAGGCC TCTACCTTGA TTCAATTATT GATCAGATGG AGTTTCCTTC TGGATCAATT
GAGTCTCCAG TAAGAACTCG ATATGAAAAG CTTGCAGAAG AACTGGGTGC AGAGGGCTTG
CACGATTTTC TCGCTTCAAA AGATGCAGCA AGCGCAGAGC TCATTCACCC AAATAACGTA
CGACGTATTG TAAGGGCTTT AGAGCTCTTG GAAGAGGGCA AGTCGTATGC TATTCATCAT
AAGGGACTAA AGGCTCATAC ACCGTATTTT GACGCTCAGA TATGGGGTCT TACGATGGAT
CGTCAGCGGC TGTATGAGCG AATCAACTTC CGAGTTGACC TTATGTTTAA ACAAGGACTT
GTTGAAGAGG TTCAGTGCCT TATTGAGACT GGTTTATCTG AGCATTGCAC AGCTGGCCAG
GCAATTGGCT ACAAAGAGTT CTTTGCGTAC TTTGCAGGAG AGCAATCACT TGAGCAAACG
TGTGAGCTTA TTAAGCAGCA CACCAGACAG TATGCTAAGC GGCAGATTTC TTGGCTTAAA
CGCGATGGTC GAGTCAGGTG GCTTGATATG GATCAACTTA CACCTGAAGA TGCACTTAAA
ATGATTATTG CGCAGCATTC TGACGTACAA TGCCAGTAG
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| Protein sequence | MSSHGSVICI VGPTASGKSS LSELVAKQLE TSVISVDAMQ IYCGMNIGTA KTPIEEREVP
LLMVDCANIS EEYSVQMFQM AARAEAHKLI DAGKTPVFCG GTGLYLDSII DQMEFPSGSI
ESPVRTRYEK LAEELGAEGL HDFLASKDAA SAELIHPNNV RRIVRALELL EEGKSYAIHH
KGLKAHTPYF DAQIWGLTMD RQRLYERINF RVDLMFKQGL VEEVQCLIET GLSEHCTAGQ
AIGYKEFFAY FAGEQSLEQT CELIKQHTRQ YAKRQISWLK RDGRVRWLDM DQLTPEDALK
MIIAQHSDVQ CQ
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