Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0749 |
Symbol | |
ID | 8413614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 832077 |
End bp | 832808 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645022331 |
Product | CDP-alcohol phosphatidyltransferase |
Protein accession | YP_003179769 |
Protein GI | 257784552 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000801084 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAAACTA GGCAGCAGCT AGCTAATCAA GTAGCATCCC AAATTAAAGA AGCAGCAGAC GCTAATGCAG CAAAAGCTCA GGCAGAAGGT ACTATTACTG ATCCAGTTGG TAGTTCTAAC AATCCTTCCA ATGCTATTTT TACCGTTGCA AACGTTATTA CATTTTGCAG ATTGATTCTT ACAATTGTCT TCCTCGTTCT CTTCTCAACA GGTGGAAATC GTTGGGTTGC GCTTGGTTGT TATGTAACCG CAGCTGTCAC TGACTTTCTT GACGGTCAGA TTGCTCGTAG AACACAGACC GTCAGCTGGC TGGGTAAAAT CATGGATCCT ATCATGGATC GAGTCCTTCT TATTACTGGT GTTCTCGGGC TCCTAATTAT TGGTGAGCTT CCTCTTTGGA TTCCGCTGTT TGTTATTGGA CGAGACGTTT ACCTTACCCT GGGTGCACTT GTAGTTCGCA AATTCCGTAG ACGTCCCATT GATGTTGCCT TTGTAGGTAA AGCTGCAACT GCATTTTTGA TGACTGGCTT TAGCCTGCTT CTCCTAGGCA TTCCCGTTGT TTCCGGACTT GGACTAGTAA ACGTTAACTG GCTTCCAGGT CTTAATTCTG AAAGTAGTGC TCTAGGCATC TTCTTTGTGT ACATAGGAAT TATTTTCTCG GCAATTACCG CCATTGTTTA TACTGTTGAA GCGGCTAAAA TAGTTAAAGA TAGTAAAATC ACTCAAGCAT AA
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Protein sequence | MQTRQQLANQ VASQIKEAAD ANAAKAQAEG TITDPVGSSN NPSNAIFTVA NVITFCRLIL TIVFLVLFST GGNRWVALGC YVTAAVTDFL DGQIARRTQT VSWLGKIMDP IMDRVLLITG VLGLLIIGEL PLWIPLFVIG RDVYLTLGAL VVRKFRRRPI DVAFVGKAAT AFLMTGFSLL LLGIPVVSGL GLVNVNWLPG LNSESSALGI FFVYIGIIFS AITAIVYTVE AAKIVKDSKI TQA
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