| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0748 |
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| Symbol | |
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| ID | 8413613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 830613 |
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| End bp | 832010 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022330 |
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| Product | hypothetical protein |
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| Protein accession | YP_003179768 |
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| Protein GI | 257784551 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000168707 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTT ATGACCACTT TGCTCACGAG GATGAATATC CAGAGCTCAA CATAGAGGCG
ATGTCTGAAC GACTAGCAAA GGCTCTGTCT TTTAAGACGG TATATGTAGA CGCTGATACA
ACTGATTGGA CGCAATTTGA TGGCCTGCAA CAGCACATTG TTGATAGTTT CCCATATGTT
ATGACCGCAG CTTCCAACGT TGAAGTGATT GGTCACTCGC TACTCATTGA AATTCCAGGA
TCTAACCATG AGCTTCCTGC ATTGATGCTT ATTGCACACC AAGACGTTGT TCCTGTTGTA
CCTGGAACGG AAGATGCATG GACGCATGAC CCCTTTGGCG GAGATGTCGA CGACACCTAT
ATTTGGGGGC GAGGCGCGCT CGACATCAAA GATATGCTCA TGGGAGAGCT TGAGGCATTG
GAGTATCTGC TTTCACAGGG TTTCTCGCCA AAACGCTCTA TCTACCTGGC ATTTGGCGAG
GACGAAGAGG TCTTAAGCCA CGGCGCCACC AAGCTTGCAG AGGTAATGGC CGCACGAGAA
ATGCGTGCAG CTTGCCTGTT AGACGAAGGT ACCACCACAT TTTTTGACGG CAGTGCATAC
GGTGCACCTA AGGCCACGGT GGCCGACATC TGTATCTCAC AAAAGGGTTT CTTGAACGTT
AAGCTCACCG CACTCGGACA TGGAGGACAT TCCTCTAATC CGTTTGGTGG AACATCACTT
GAGCATTTGA CCTGCGCGCT TGCAGCTCTT TCTAAAGCTA AACCTCAACC TGAGCTTAAT
GATATTGTCA AAGAAACCTT TAAAGTTCTT GCACCAGAAA TTACAGAAGA ACCTTTTGTA
TCCCTGGTAC ATGATGTTGA TACAAATGCA GATAAAATTG CAGTTGCAGC AGCTCAGATT
AAAGAGATCT ATCCATTTGT CACTACAACA TATGCCTTTA ATATGCTTGA GGGTTCAAGC
AGTGCGGCTA ATGTTATGCC TGGTAATGTC AATGCAATCA TCAACATCAG GCTGCTTCCT
GGTGTAAGCG TCAACAAAAC TGTTGAGCAC ATTAAACAGG TGGTGGCTCA AGTTGACCCT
AACATCGACG TTGAGGTTTT GCACTCCACT TCTGCGGGAA GAATTGATTC TCCAATTGGA
GCCGGCTATC AAGAACTCAA GGCCATCATG GAACATTACC ATCCAGGCGT TACTTTTGTT
CCATCGTTTG TATGTGGTGG TACCGATTCC GTTCGATATG AGGGAATCTG CGATTCTATT
CTGCGTATTT GTCCTTTTAG GCCAACACCA GAAGATGAGG CAAACGGCGT TCACGGCATT
GATGAACGTA TCGAGAAACG CGTTTATGCC CAAGGTATCC GCGTTCTTGT GGCCTTTGTT
AAACAAATGT GCCAATAA
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| Protein sequence | MNIYDHFAHE DEYPELNIEA MSERLAKALS FKTVYVDADT TDWTQFDGLQ QHIVDSFPYV
MTAASNVEVI GHSLLIEIPG SNHELPALML IAHQDVVPVV PGTEDAWTHD PFGGDVDDTY
IWGRGALDIK DMLMGELEAL EYLLSQGFSP KRSIYLAFGE DEEVLSHGAT KLAEVMAARE
MRAACLLDEG TTTFFDGSAY GAPKATVADI CISQKGFLNV KLTALGHGGH SSNPFGGTSL
EHLTCALAAL SKAKPQPELN DIVKETFKVL APEITEEPFV SLVHDVDTNA DKIAVAAAQI
KEIYPFVTTT YAFNMLEGSS SAANVMPGNV NAIINIRLLP GVSVNKTVEH IKQVVAQVDP
NIDVEVLHST SAGRIDSPIG AGYQELKAIM EHYHPGVTFV PSFVCGGTDS VRYEGICDSI
LRICPFRPTP EDEANGVHGI DERIEKRVYA QGIRVLVAFV KQMCQ
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