| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0709 |
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| Symbol | |
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| ID | 8413570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 787203 |
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| End bp | 787982 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022287 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_003179729 |
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| Protein GI | 257784512 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0105503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000024348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | GTGCAGTTTG ATACAGACAA ACTCGTCCAG TATTTCTCTG ACGCGCCAGA AGATATCAGT
CTTTCTGATA TCAATTTAGA AACTATTCCG TCTCACGTTT CCATCATTAT GGATGGAAAC
GGTAGATGGG CTACAGCTCG CGGTCTTGAT AGAACAGAAG GTCACAAGGC TGGTGTTCTT
TCCTTGCGCG AGGCTGTTAC TACAAGTGTG CGCCTCGGGT TGGACGTTCT GTCAGTTTAT
TCGTTCTCTA CTGAAAACTG GAAACGTCCC CAGCACGAGG TTGACTTGCT CATGCGTCTT
TTTGCAGAGA CATTGCTCAA AGAACTTCCA CTGTTCTACC AGGAGAATGT CAAACTACGT
TTCTTTGGTG ATCTTGAGGC TTTACCAGAA AAGACTCGCA AGACTTTCCA GCGCGGACTT
GATGAAACTG CACAAAACAC TGGTATGACT TTTGCGTTAG CGGTTAATTA TGGCTCTCGT
GCAGAGTTGA CTAGGGCAGC TGTTTTTCTT GCTAATCAAA TTGCTGAAGG TAAAGTCTCT
GCTGATTCGG TAACTCCATC AGATTTTGAG AAATACCTCT ACACAGCTGG ACTTCCTGAT
CCAGATCTTT TGATTCGTAC CTCAGGAGAG CTTAGGCTTT CTAACTATTT GTTGTGGCAG
CTGGCTTACT CGGAGCTGTA TGTCACGCAA ACTTACTGGC CTGACTTCTC TAAATGGGAT
GTTTTGCGCG CCATTAAGGA CTATCAGGGT CGCGAAAGGC GATTCGGAGG AGTGAAATAG
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| Protein sequence | MQFDTDKLVQ YFSDAPEDIS LSDINLETIP SHVSIIMDGN GRWATARGLD RTEGHKAGVL
SLREAVTTSV RLGLDVLSVY SFSTENWKRP QHEVDLLMRL FAETLLKELP LFYQENVKLR
FFGDLEALPE KTRKTFQRGL DETAQNTGMT FALAVNYGSR AELTRAAVFL ANQIAEGKVS
ADSVTPSDFE KYLYTAGLPD PDLLIRTSGE LRLSNYLLWQ LAYSELYVTQ TYWPDFSKWD
VLRAIKDYQG RERRFGGVK
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