| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0706 |
|---|
| Symbol | |
|---|
| ID | 8413567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | + |
|---|
| Start bp | 784931 |
|---|
| End bp | 785803 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 645022284 |
|---|
| Product | translation elongation factor Ts |
|---|
| Protein accession | YP_003179726 |
|---|
| Protein GI | 257784509 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000134038 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000259641 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGA TTACCGCAGC ACTTGTTAAG CAGCTTCGTG ATATGACCAG CTCTCCTATG
ATGGAGTGCA AGAAGGCACT TGTCGAGGCT GAGGGCGATA TTGAAAAGGC AGTAGATATT
CTTCGTACTA TGGGCGTTGC TAAGGCAGTT AAGCGCGCTG GCCGTGATAC CAACGAGGGT
ACCATTGCTA CTTTCATCAG CCCAGACGGT AAGACTGGCG CAATCCTTGA GCTCTCTTGC
GAGACTGACT TTGTTGGTAC TAATCCACAG TTCACTGGCT TTGCTGGCGA TCTTGCTGCA
GTTGTTGCCG AGAGCAACCC AGCTACCCTT GAGGAGCTGA AGGCCGCTAA GCTTGGCGAC
GAGACTGTTG ACGAGGCAAT CACCGATAAG ATCCACAACA TCGGCGAGAA CATGCGCGTT
CTTCGTTTTC AGCGCGTTGA GGCTACAAAT GGTGCTCTTG CTAGCTATAT CCACCTTGGT
GGCAAGCTCG CTGACATTGT TACCTTTGAG TTCAACAAGC CAGAGACCGC TGAGTCTCAG
GATTTCAAGA ACTTCGCACA TGATGTTGCT ATGCAGGTAG CTGCAGCTGC TCCAGTTGCT
GCTCGCCGTG AGGATGTTCC ACAGGACATT GTTGATCATG AGCTCTCCAT TTATAAGGCA
CAGGCTGCTG AGTCAGGTAA GCCTGAGGCT ATTCAGGAGA AGATGGCTTA TGGTCGCCTC
GAGAAGTACT ACAAGGAGTA TGTCCTTACT GAGCAGGCAT TTGTTAAGGA CCCAGATATG
ACTATTTCTG AGTATGCAAA GCTGCTCTCC AAGAAGGTTG ACGACGAGGT TAAGATTGTC
AGTTTCGTGC GTTTTGCTTT TGGTGAAGAG TAA
|
|---|
| Protein sequence | MAEITAALVK QLRDMTSSPM MECKKALVEA EGDIEKAVDI LRTMGVAKAV KRAGRDTNEG
TIATFISPDG KTGAILELSC ETDFVGTNPQ FTGFAGDLAA VVAESNPATL EELKAAKLGD
ETVDEAITDK IHNIGENMRV LRFQRVEATN GALASYIHLG GKLADIVTFE FNKPETAESQ
DFKNFAHDVA MQVAAAAPVA ARREDVPQDI VDHELSIYKA QAAESGKPEA IQEKMAYGRL
EKYYKEYVLT EQAFVKDPDM TISEYAKLLS KKVDDEVKIV SFVRFAFGEE
|
|---|
| |