Gene Apar_0685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0685 
Symbol 
ID8413546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp764296 
End bp764934 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content41% 
IMG OID645022263 
Productmetal dependent phosphohydrolase 
Protein accessionYP_003179705 
Protein GI257784488 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1713] Predicted HD superfamily hydrolase involved in NAD metabolism 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR00488] putative HD superfamily hydrolase of NAD metabolism 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000109701 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0222336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAA CACTTATATC AAAAGATATT CTTTATACCC TAGAACAACA GACGCTTATT 
AATCAGCTGG AGTCTGATCT GAAGTCTCAT ATGTATGACA AGAATCCTAA ACGTTTTGCA
CACTCTATCT CTGTTGGACA TTGTGCAGAA ACGCTTGCAC AGGTTTATGG TGCAGATATG
TTTAGCGCTC GTGTTGCAGG TATTTTGCAT GATTGGGAGA AGTTACTCTC TGACGCAGAT
ACCCTTGAAC TGGCAGAGCG CTTTCGTATT CAAGTAGAAG CGCCTTATCA GAAAATTGTA
GGACTCTTGC ATGGTCCTCT CGCCGCAAAA ACTCTACCAG CAATCTATCC TTGGCTCTCT
AATGAGATTC TCAGTGCTAT TCAGAAGCAC ACCGCAGGTG ACCGACAGAT GAGCAAGCTG
GATAAAATTT TGTATGTAGC AGACCTTATT GAACCGCTGC GTCCAAACTT TACAGCAGTT
GAAGAGTCAC GAAACGTATA TTTACGCGGT GGTTCTCTCG ATGAGCTTTA TGAGTCGGCG
TTTTGTAACG TTATGATGTA TGTAATTTCA TCAAGAAGGT ATTTGTATCC AAACTCAATT
GCCCTATACA ATGAGATGAT TGAAAAGACA TCTAAGTAG
 
Protein sequence
MERTLISKDI LYTLEQQTLI NQLESDLKSH MYDKNPKRFA HSISVGHCAE TLAQVYGADM 
FSARVAGILH DWEKLLSDAD TLELAERFRI QVEAPYQKIV GLLHGPLAAK TLPAIYPWLS
NEILSAIQKH TAGDRQMSKL DKILYVADLI EPLRPNFTAV EESRNVYLRG GSLDELYESA
FCNVMMYVIS SRRYLYPNSI ALYNEMIEKT SK