| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0683 |
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| Symbol | |
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| ID | 8413544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 762053 |
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| End bp | 763501 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022261 |
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| Product | GTP-binding protein Obg/CgtA |
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| Protein accession | YP_003179703 |
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| Protein GI | 257784486 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0536] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA
[TIGR03595] Obg family GTPase CgtA, C-terminal extension |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000715993 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0309742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAACTT TCACTGATCT TTGTCACATC AACGTAAAGG GCGGAGACGG CGGCGCGGGC
TGCATGTCTT TTCGCCGAGA AGCATATGTA CCAAAAGGTG GCCCTGATGG TGGCGATGGT
GGTCATGGAG GCAATGTTGT CATTGTTGCA GACGCACAAC TTTCGTCTCT GATTGATTAC
CGCTATAAAC ATCACTTTAA GGCCGAGCGA GGTACCCATG GTAAAGGCGC TCGCCGTCAT
GGTTCTGACG GACAGGATTT GCTGCTCAGG GTACCTTTGG GAACTGTCGT ACGCGAGCTT
GATCCAGAAA CACAAGAACC TCTTTATGAG ATTGCTGATC TTACCTCTCC AGGCGAGCAG
GTAGTTGTTG CTCCTGGTGG CAATGGTGGT CGCGGCAACA TTCATTTTGT CACCTCTGTT
AGACGTGCAC CTGCATTTGC CGAGAAGGGC GAACCAGCCC AAGAGCACTG GATTGAGCTA
GAGATGAAGC TCATGGCAGA TGTGGCCTTG GTTGGCATGC CTTCTGTTGG TAAGAGCTCT
CTTATTGCAC GAATTAGTGC CGCTCGCCCA AAGATTGCCG ACTATCCTTT TACCACGCTT
GTTCCAAATT TGGGCGTTGT GCGTGCGCAA AACGGTCAGT CATTTGTCTG CGCAGATGTT
CCTGGTCTTA TCGAGGGTGC CTCTGAAGGC AAGGGCCTTG GCCATCAATT CCTTCGTCAT
ATTGAGCGTA CAGCGCTCAT TGTTCATATG GTTGATGTTA CTGGTGGTTA TGAAGGTAGA
GACCCTGTAG AGGACTATTA CGCTATTAAT AAGGAGCTCA AAGCGTATGC CTCAAAGCTA
GCTGATCGTC CTCAGATTGT GGTAGCAAAC AAATGTGATA TGCCTGGTAC TGAAGATGCT
ATTGAGGCTC TCAGAAAGGC CGCTGAAGCT GATAACAGGA CTTTCTTTGC TATTTCTACC
GTAACTGGTT TAAATCTTGA TGACTTTGTT ACAACCTGCG CTGCAGAGGT AGCCGAGCTC
CGCAAAGAAA TTGCTATCAC TACACCTACG GTTGATCGCA GTGAGTCTTG GGAGAACCAG
CGGCTTCGTC GTGATAGTAA GTTGCGTATT GAGCGAGAAG AACGTCATGC CTGGCGTGTC
TCTGGCGGCC AGATTGAGCG TATGGTCATC CAGACTGACT GGGACAATGA TGAGGCTGTG
GCATACTTAC AGCGTCGTCT TGATCGTATG GGTCTTGAGT TGCAGCTGGC AAAGGCTGGA
GCTGTTGATG GAGACGAGAT TCGCATTCTT GAGCTAACCT TTACTTATGA GGATTCAACC
AAGCCAAATA CAGATGGTAT AAAGATCCCT AACGAGGATG CCTTGGATCA GCAATTTGAC
GATGTTGAGT TTGAAGACGC TCCATCTGAT GCGTCTCGTT TAACTGAGGC TTCTTCAGAA
ACTGAGTAG
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| Protein sequence | METFTDLCHI NVKGGDGGAG CMSFRREAYV PKGGPDGGDG GHGGNVVIVA DAQLSSLIDY
RYKHHFKAER GTHGKGARRH GSDGQDLLLR VPLGTVVREL DPETQEPLYE IADLTSPGEQ
VVVAPGGNGG RGNIHFVTSV RRAPAFAEKG EPAQEHWIEL EMKLMADVAL VGMPSVGKSS
LIARISAARP KIADYPFTTL VPNLGVVRAQ NGQSFVCADV PGLIEGASEG KGLGHQFLRH
IERTALIVHM VDVTGGYEGR DPVEDYYAIN KELKAYASKL ADRPQIVVAN KCDMPGTEDA
IEALRKAAEA DNRTFFAIST VTGLNLDDFV TTCAAEVAEL RKEIAITTPT VDRSESWENQ
RLRRDSKLRI EREERHAWRV SGGQIERMVI QTDWDNDEAV AYLQRRLDRM GLELQLAKAG
AVDGDEIRIL ELTFTYEDST KPNTDGIKIP NEDALDQQFD DVEFEDAPSD ASRLTEASSE
TE
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