Gene Apar_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0624 
Symbol 
ID8413484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand+ 
Start bp701591 
End bp702178 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content49% 
IMG OID645022202 
ProductGTP cyclohydrolase I 
Protein accessionYP_003179645 
Protein GI257784428 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCAG AAAATAACTA TAAAGAGCTT GATCAAGAGC GTGTAAAAGC TGCGGTCACT 
GAATTTTTGC TTGCTATTGG TGAGGATCCA GAGCGAGAAG GTCTGCTTGA TACGCCAGAC 
CGTGTTGCTC GCGCTTGTGT GGAGCTCTTT GGCGGTATGC AGGAAGACCC TGCAGTTCAC 
CTTCGCAAAC AGTTCCACGA AGAAGGCAAT AAAGAGATGG TTATTGTCCG CGACATTCCT 
TTCTCATCTA CTTGTGAACA TCACATTTTG CCATTTGTAG GTAAGGCACA TGTCTGCTAC 
ATCCCACAAA ATGGTCGTAT TACCGGCCTT TCCAAGATTG CTCGCTGCGT CAGCGGATAT 
TCTCGTCGTC TGCAGGTACA GGAGCGCTTA ACGGGCCAGA TTGCAGATGC CATGGTAGAA 
GAGCTAGATC CCTTGGGTGT TTTGGTGGTT ATGGAGGCCG AGCATACGTG CATGAGCATG 
CGCGGCATTA GGGCATCGGG TGCTTTGACC ACTACTTCTG CAGTTCGTGG CATTTTTAAG 
ACTAACGAGA AAACCCGTGC AGAAGCTATG CGTCTGCTTG GTCTATAA
 
Protein sequence
MAAENNYKEL DQERVKAAVT EFLLAIGEDP EREGLLDTPD RVARACVELF GGMQEDPAVH 
LRKQFHEEGN KEMVIVRDIP FSSTCEHHIL PFVGKAHVCY IPQNGRITGL SKIARCVSGY 
SRRLQVQERL TGQIADAMVE ELDPLGVLVV MEAEHTCMSM RGIRASGALT TTSAVRGIFK 
TNEKTRAEAM RLLGL