| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0617 |
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| Symbol | |
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| ID | 8413477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 692763 |
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| End bp | 693839 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022195 |
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| Product | glycosyl transferase family 8 |
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| Protein accession | YP_003179638 |
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| Protein GI | 257784421 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.170905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.336264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCAA GCTCATCTGA TGAGCTAGGT CTTGCTCTTA ACGACGTTGT GCTTGTTTTT
GCCTGTAGTG ACAACTTTGT ACCATATTTA TCTGTAGCAA TTCAGTCCAT TATTGAGAAC
GTCAATCCAG AGCGTCGCTA CGACATCATT GTTCTGACTC GTGACCTCTC TCCTACCAAC
ATGATTACGC TTACTCGTCA GGCGCAGCTT GTTAACAACG TGCATGTTGG TTTTTTGGAT
GTTGACGCCG CCCTTGGTGA CATTGAGCTT CCTCATCATG GTCACTTTAG ACCAGAAACC
TACTACAGAC TTCTTGCTCC CTCACTGCTT CCTAACGTTA ATAAAGCCAT CTATCTTGAT
TCTGACCTGG TAGTTAATAC CGACATTGCA GAGCTCTACG ATATTGATAT CACTGGATAT
TTGGTGGGTG CTACGCGCGA CGCAGATACT ATTGGCCAGA TTGATGGCTA TGACGCCACA
GTTGGACCCT ACCTAAAAAA TGAACTGGGC ATGGATGATC CTCACGATTA CTTCCAAGCA
GGCGTCATTT TAATGAACCT AGAAGAGATT AGAAAGCAGA TTTCTCCTGA AGAGTTTCTC
AAGGTCTCAA CCATGCGTAC ATGGCGCTGG CTTGATCAAG ATGTCCTCAA TAGGTTTGTA
AACGGTCACT ATCTTCGTAT TAATATGAAG TGGAATTACC TGGTAGATTG GCAGTTTCTC
CGTCGTGATC ACATTGTTGC TCAGGCACCA AAAGATATAC GAGAAGAATA CGAAGAAGCT
CGTAAGAATA TTTGCATTGC GCATTTTGCG GGACCTGACA ACAGACCTTG GCTCTATCCA
AACTCAGATC TTGCAGGTCT TTTCTGGTTC TATGCTCGCC GCTCCCCTTA CCTTGAGGAA
CTTCGTTCAC AGCTTGAAGA GTCAAGACGC ACTGTAAGAG GTCTTTCTCA TCGCGTGCAA
AGCGGTGTAC TTTTCCGTGG CTTGATGCCT TTGTTTGATA CCGTTTTTCC ACCAGGTACC
AAAACACGCA CCAAAGTTAT TACGTCATAC AACAAACTTG GTGGCGGCAA TCTGTAA
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| Protein sequence | MLASSSDELG LALNDVVLVF ACSDNFVPYL SVAIQSIIEN VNPERRYDII VLTRDLSPTN
MITLTRQAQL VNNVHVGFLD VDAALGDIEL PHHGHFRPET YYRLLAPSLL PNVNKAIYLD
SDLVVNTDIA ELYDIDITGY LVGATRDADT IGQIDGYDAT VGPYLKNELG MDDPHDYFQA
GVILMNLEEI RKQISPEEFL KVSTMRTWRW LDQDVLNRFV NGHYLRINMK WNYLVDWQFL
RRDHIVAQAP KDIREEYEEA RKNICIAHFA GPDNRPWLYP NSDLAGLFWF YARRSPYLEE
LRSQLEESRR TVRGLSHRVQ SGVLFRGLMP LFDTVFPPGT KTRTKVITSY NKLGGGNL
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