Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0598 |
Symbol | |
ID | 8413453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 665604 |
End bp | 666794 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 645022171 |
Product | aminotransferase class I and II |
Protein accession | YP_003179619 |
Protein GI | 257784402 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.012306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.353633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTACG ATTTTGAATC TCGCGTTAAT CGAGCTGGTA CTGGTTCTAG AAAATGGAAC GTCATGTATG ACGTTAATCC AGATGTAGCT CCTGGTATTC CACCTTTTTC TGTTGCTGAT ATGGAATACC ATACAGCTCC AGAGATTGTT GAGGGCCTTA AGGAATATAT CAACGATGCA ATTCTTGGTT ATTCCACGCC AACTAATCAG ATGAAGCAGG CTGTGTGCAA GTGGATGAAG ACTCGTCATG ACTGGGATGT AAAGCCAGAG TGGCTGCTCA ACTCTTCTGG CGTGGTGCCT GCGCTTTTTG CATCTGTTAC TGAGTTTACC AAGCCAGATG AGGGTGTCAT TTTGTTCACG CCTGTCTATC GTCCATTCTA CATGGCAGTA GAGGAGAATA ACCGTGCGCT GGTAGAGTGT CCGCTCGTCT TGTCAGAGGG TCCTCACTAC GATATTGACT TTGATTTGTT TGAGAAGCTT GCTGCTGAGC CAAAGAATAC CATGGTCATT TTGTGTTCAC CTCACAATCC AAGTGGCCGT GTGTGGACCA AAGAGGAGCT TACGCGTATT GCAGAGATTG CGGTTAAGCA TAACCTCATT GTGGTTGCCG ACGAGATCCA TCATGACCTT ATCATGCCAG GCTCCTCGCA TAGCGTTTTT GAAACGCTCT CTGATGCGGT TGCAGCACGT ACTATTACCT GCACGTCTCC ATCAAAGAGT TTCAACCTGG CCGGCACACA GTTCAGCAAC ATTATTGTGA GCAACCCAGA ACTGCGTGAG CGCCTTGAGA AGCGCTTGCA GGCCCGAGAG ACTACTTCAT GCAATCCAAT CAGCTTCAAG GCCTGTGAGC TGGCTTACAG TAAGGGCGGA GCATGGCTGG ACGCATGTAT CAAGGCCGTT GATGCCAACC AGAGGCTGCT CCTGGACTTC TTTACCACTA AGCATCCTCG CGTGAAGCTT GCGCCAATCA CGGGAACCTA CCTTCAGTGG CTCGACTTCA GAGATCTTGG CCTTACGTCA GAAGAGCTTA ATCACCTCTT GCAGTTTGAG GCCCAGGTAT TTTTCACCGA CGGCGTCTTC TTCGGCGAGG CCGCCCAGGG TTTCAAGCGC TGGAATTTGG CAGCCCCTCG CGTCGAGATT GAAGAGGCGT TGGATCGCCT GGACGTAGCG CTCACGGCTC ACGGATTCTA A
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Protein sequence | MSYDFESRVN RAGTGSRKWN VMYDVNPDVA PGIPPFSVAD MEYHTAPEIV EGLKEYINDA ILGYSTPTNQ MKQAVCKWMK TRHDWDVKPE WLLNSSGVVP ALFASVTEFT KPDEGVILFT PVYRPFYMAV EENNRALVEC PLVLSEGPHY DIDFDLFEKL AAEPKNTMVI LCSPHNPSGR VWTKEELTRI AEIAVKHNLI VVADEIHHDL IMPGSSHSVF ETLSDAVAAR TITCTSPSKS FNLAGTQFSN IIVSNPELRE RLEKRLQARE TTSCNPISFK ACELAYSKGG AWLDACIKAV DANQRLLLDF FTTKHPRVKL APITGTYLQW LDFRDLGLTS EELNHLLQFE AQVFFTDGVF FGEAAQGFKR WNLAAPRVEI EEALDRLDVA LTAHGF
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