Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0530 |
Symbol | |
ID | 8413384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 613726 |
End bp | 614406 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645022103 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003179552 |
Protein GI | 257784335 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000301669 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGAACTTC GCGAGTACAT GTCCATTCGC AGGTCTTACA ACTTGGTTAG AAGAGTGGTG CCTGCTAACA GACGACTCAC ATTTGAAGAG TTTGCTATTT TGTGTCGTCT TAATGTGAAG GGTGCTTCTG TTAAGACTTC AGAAATTGCC GAGTATCAGA GTGCTCTTCG TCCTACGATT ACTCATCGTA CCTCGCACTT GGCAAGGCTT GGTTTCATCA AGAGAGATGA AGGCACTATT GATCGACGCA ACGTAGTGTG CATTATTACA GAAAAAGGTG TAGAAGCAGT AGAGGAGCTT TCTAAACTCA CTTGTGCTCG TATTGCACCC GGTCAGGCAC TTTCCCGCAC TTCGTTTGAA CGTATTGTTA TGTATGTTAA CGCTATGGGA GCTCTGTATT GCCGAGCTGC AGATATGGTG CTTCTTGCAA TTTTAGATTC TCCTAAAGAC GCTCTTTCAA TTACAGAGAT TGTCGATGCG CTTGGACTAC TACAACCAAC TGTCTCTATG TCTCTTACTG CTTTGGCAGA AAGTGGTTTG GTACAGCGCA AACATGACGA TGTCCTTTCA AGAAGGGTAA CCATGGTTGA GCTCACACCT GCAGGTAAAA CGTATACCAA AGAAATTGTT CAGCAAATTG AAGATATCAT TGTTAAAAGA AAGAGTCGTA CAGCTGTTTA A
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Protein sequence | MELREYMSIR RSYNLVRRVV PANRRLTFEE FAILCRLNVK GASVKTSEIA EYQSALRPTI THRTSHLARL GFIKRDEGTI DRRNVVCIIT EKGVEAVEEL SKLTCARIAP GQALSRTSFE RIVMYVNAMG ALYCRAADMV LLAILDSPKD ALSITEIVDA LGLLQPTVSM SLTALAESGL VQRKHDDVLS RRVTMVELTP AGKTYTKEIV QQIEDIIVKR KSRTAV
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