| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0528 |
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| Symbol | |
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| ID | 8413382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 609983 |
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| End bp | 611479 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022101 |
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| Product | nicotinate phosphoribosyltransferase |
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| Protein accession | YP_003179550 |
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| Protein GI | 257784333 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01513] putative nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.633345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000475164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCACTCA CTGATCGTAC CAAGCCTTCG GATGTAAGTC TTAATACAGA TTTGTATGAG
CTCACGATGG CTCAGGGTTA TTGGGAAGCC GGTCTTGTTG ATACTGAAGC ATGCTTTACC
GCATTCTTCC GCGAGAATCC CTTTAATGGT GGATTTGCTA TTTCCTGTGG TACCGGTCAG
ATTGCTGATT TAGTTGAGAA CTTTATCTTT GAAGATGATG ATATCGACTA TCTAGCAAGC
ATTAACTCTC CTGGTGGTGG CCGTCTTTTT AAGCCAGCGT TTCTCGAGTT TTTGCGTAAT
CACAAGCTTA ATGTAACCAT TGATGCAATC CCAGAAGGAG AGCTTGTATT CCCACGTGAG
CCTATGGTTC GAGTTGAAGG CTCTATTGTT GACTGTCAGC TCATCGAGAC TGCTCTGCTT
AACTTGGTTA ACTTCCAAAC GCTGGCTGCA ACTAAGTGTG CTCGCGTTAT CAAGGCAGCT
CAGGGCAATC CTGTTTCTGA CTTCGGTCTG CGCCGAGCAC AGGGTCCAGA TGGTGGATTG
GCGGTTGCTC GCGCCTCTTA TATTGCAGGT GCTTCAAGCA CTTCAAATGT CCTTGCTGGC
AAAATCTACA GCATTCCTGT CTTTGGTACC CACGCACACT CTTGGGTTAT GTCCTTTGAT
ACTGAGCTTG ATGCATTTAG GGCATTTGCA AAATCCAGCC CAACCAACTG CTCACTTCTG
CTTGACACCT ACGATGTTCA TGAGGGCATT AAGAACGCTA TCATTGTGGC AAAAGAGATG
GAAGAGCGTG GCGAGCGTTT AAGTGCCATT CGCATTGACT CTGGAGATTT GGCACGTCTT
TCCAAGGAAG CGCGCAAGGC GTTTGATGAA GCTGGTCTTC CATACATAAA GATTTCTGTT
TCAAATGATC TTGACGAGTA CACTATTCAG TCGCTCTTTG CTCAAGGCGC ACCTATAGAT
GCTTTTGGTG TAGGTACTAA GCTTGCTACC TGCGATCCTC AGCCTTCTCT TGGTGGTGTC
TATAAGCTGA CCGCTCGTCG TCAGTCTGCA AATGAGCCTT GGACTCCTGT TATCAAGCTG
TCTGAGATGG CATACAAGCG CACCGTTCCT GGCATTCAAC ACATCCGTCG TTTTTATGAT
GCAAACGGCT GCCCTGCGGG TGATATGATT TTTGATCCAG ATTACCTGGT CACCAAGAAT
CCAGAATCTA AGGCAACTGT TGTAGATATC ATTGATCCAT ACTCAACTCA CAAACTTGAG
GGAACTTCTC GCGAATTGAT GATTCGACTG GTAGAAGATG GCAAGCGCGT AGGGGAGAGC
GAGTCCATTG AGGTTGCTCG CGATCGTTGT CATGCGGCGC TCATGCGTCT GGACGCGGCG
TATACACGCT TCCTAAACCC TCAAATTTAT CCTGTGGGTC TTGAGCGTGG TTTGGCTCAT
TTGCGTCACG AACTTGCTGC TCAACATCAG GTAAAATCTT CCGAGGAAAC TGAGTAG
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| Protein sequence | MSLTDRTKPS DVSLNTDLYE LTMAQGYWEA GLVDTEACFT AFFRENPFNG GFAISCGTGQ
IADLVENFIF EDDDIDYLAS INSPGGGRLF KPAFLEFLRN HKLNVTIDAI PEGELVFPRE
PMVRVEGSIV DCQLIETALL NLVNFQTLAA TKCARVIKAA QGNPVSDFGL RRAQGPDGGL
AVARASYIAG ASSTSNVLAG KIYSIPVFGT HAHSWVMSFD TELDAFRAFA KSSPTNCSLL
LDTYDVHEGI KNAIIVAKEM EERGERLSAI RIDSGDLARL SKEARKAFDE AGLPYIKISV
SNDLDEYTIQ SLFAQGAPID AFGVGTKLAT CDPQPSLGGV YKLTARRQSA NEPWTPVIKL
SEMAYKRTVP GIQHIRRFYD ANGCPAGDMI FDPDYLVTKN PESKATVVDI IDPYSTHKLE
GTSRELMIRL VEDGKRVGES ESIEVARDRC HAALMRLDAA YTRFLNPQIY PVGLERGLAH
LRHELAAQHQ VKSSEETE
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