| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0524 |
|---|
| Symbol | |
|---|
| ID | 8413376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | + |
|---|
| Start bp | 605742 |
|---|
| End bp | 606101 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 645022095 |
|---|
| Product | ribosomal protein L20 |
|---|
| Protein accession | YP_003179546 |
|---|
| Protein GI | 257784329 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000408752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000274126 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAG TTAAGCGCGC AGTTGCTGGC CGCAAGAAGC GTCAGACGCT CGTCGAGCGC
ACAAAGGGTT ATTACGGAAC TTCTTCTCGT ACTTTCCGTG GTATGAAGGA GCAGTCACAG
CATTCTGGTC AGTATGCTTA CCGCGACCGT CGCAACAAGA AGCGTGATTT CCGCGCACTA
TGGATTCAGC GTATCAACGC TGCAGCACGC ATCAATGACC TTTCTTACAG CAAGTTTATG
CACGGCCTTA AGCTTGCTGG CGTCGAGCTT GATCGCAAGG TTCTCGCAGA GATTGCTTAC
TCTGACGAGC AGGGCTTTGC AGATCTTGCA GAGATTGCTA AGAAGGCACT TGCTGAGTAG
|
|---|
| Protein sequence | MARVKRAVAG RKKRQTLVER TKGYYGTSSR TFRGMKEQSQ HSGQYAYRDR RNKKRDFRAL
WIQRINAAAR INDLSYSKFM HGLKLAGVEL DRKVLAEIAY SDEQGFADLA EIAKKALAE
|
|---|
| |