Gene Apar_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0524 
Symbol 
ID8413376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp605742 
End bp606101 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content52% 
IMG OID645022095 
Productribosomal protein L20 
Protein accessionYP_003179546 
Protein GI257784329 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.08752e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.74126e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAAGAG TTAAGCGCGC AGTTGCTGGC CGCAAGAAGC GTCAGACGCT CGTCGAGCGC 
ACAAAGGGTT ATTACGGAAC TTCTTCTCGT ACTTTCCGTG GTATGAAGGA GCAGTCACAG
CATTCTGGTC AGTATGCTTA CCGCGACCGT CGCAACAAGA AGCGTGATTT CCGCGCACTA
TGGATTCAGC GTATCAACGC TGCAGCACGC ATCAATGACC TTTCTTACAG CAAGTTTATG
CACGGCCTTA AGCTTGCTGG CGTCGAGCTT GATCGCAAGG TTCTCGCAGA GATTGCTTAC
TCTGACGAGC AGGGCTTTGC AGATCTTGCA GAGATTGCTA AGAAGGCACT TGCTGAGTAG
 
Protein sequence
MARVKRAVAG RKKRQTLVER TKGYYGTSSR TFRGMKEQSQ HSGQYAYRDR RNKKRDFRAL 
WIQRINAAAR INDLSYSKFM HGLKLAGVEL DRKVLAEIAY SDEQGFADLA EIAKKALAE