| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0515 |
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| Symbol | |
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| ID | 8413366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 594261 |
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| End bp | 595154 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022085 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_003179537 |
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| Protein GI | 257784320 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00442329 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATATGA AGAACATAAC TGGTGCAATT ACCGCATTAG TAACCCCATT TGATGCTCAA
GGAAATGTTG ATTTTGAGGC ACTTGAGCAC TTTGTTGACT TCCAGATTGA ACAGGGAATT
GACGGTATTC TCGCTCTAGG CACTACCGGA GAGTCCTCAA CCATGACAGA CGAGGAGGAC
ATCGAGGTAG TCAAGACAAT TCTTGCACGA GCCCAGGGTA GAGTCCCTGT TATCGGTGGT
GCTGGTTCCA ACTCTTCTGC TGAGTCTTTG CGCAAAGCAG AAGCTCTTGA GAAGGCAGGT
GTTGATGGTC TGCTACTGAT TACTCCTTAC TACAATAAGA GTAATGAAGA GGGCATCTAC
CAGCACTTCT CGTATGTACT AGACCGCGTT GATGTCCCTT GTATCTTGTA TAATATCCCC
GGTAGAACGG GCTGCTCAAT TTCTGAACGC AACGTTCAGA GACTTGCAGC ACATCCAAAT
GCATGGGGTA TTAAAGAGGC TTCTGGAGAC ATTGCATATG CAACAAGGGT TGCTCGTTAT
TTGAGCGATG ACTTTACTAT GTGGTCAGGA AATGACGACA TGATTGTGCC TTTGCTTTCT
CTTGGTGCTT CCGGTGTTAT TTCTGTTTGG TCTAACCTTG ATCCAAAGAT GGTTCATGAC
CTGGTAGCTG CGTGGCATCG CGGAGAGATT TCTCTTGCCC GTGAGCTGCA ACTTCAGTAT
CTTGACCTGG TCCATGCACT TTTCTGCGAG GTTAATCCAA TTCCTGTAAA AGCCGCGCTG
GCTCGTATGG GACTTATGGA AGAGAATTAT CGTCTGCCTC TGTGGAAGAT GACGGAAGAG
CACGCTGAGG TGCTTGAAAA TGCTATGAGA AAGGCTGGTC TTCTTGATGC CTAG
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| Protein sequence | MDMKNITGAI TALVTPFDAQ GNVDFEALEH FVDFQIEQGI DGILALGTTG ESSTMTDEED
IEVVKTILAR AQGRVPVIGG AGSNSSAESL RKAEALEKAG VDGLLLITPY YNKSNEEGIY
QHFSYVLDRV DVPCILYNIP GRTGCSISER NVQRLAAHPN AWGIKEASGD IAYATRVARY
LSDDFTMWSG NDDMIVPLLS LGASGVISVW SNLDPKMVHD LVAAWHRGEI SLARELQLQY
LDLVHALFCE VNPIPVKAAL ARMGLMEENY RLPLWKMTEE HAEVLENAMR KAGLLDA
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