Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0450 |
Symbol | |
ID | 8413299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 518470 |
End bp | 519558 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645022018 |
Product | lipolytic protein G-D-S-L family |
Protein accession | YP_003179472 |
Protein GI | 257784255 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTGG GAGAGTGGAG CATCAGTTCT CCAGCATCTA GGTTTTTACT TGGTGCGCCA TGGTCAGAAA AACTTGCTCA CGGGTGGGTT CATCCGCTGC GTATTTCTCC CAATCAGCTT AGAGTTATTG GCTCTTGTTC TTCCTGGCAC CCCGGTCTTT TTAAACAGAT GGCAGCGTGC ACTTCAGATA TTCAAGTTAC TTTTACCACG GACAGCTCAG AAGTGGTACT TGATCTAAAA ATTGATGAAC TTCCTAAAGG CTCCTCTTCT GTTTTACAGT TACTTAAAGC TACGTATCTT AAAAAGCTCA GCTCTGTATT TGTGACGGTT GATGGTAAAC CTTACAAGAA CTTCTCGCTG GATGATGTAG GTGAACATAC ACTTTCTATT CATCTAGAAA CAGAAACCTC TGAAGATGAC CTTGCTAGAC TTCCAGGTTT TAACGACACA CATCGCGTAA ATGTTTACTT GCCCTGTTTG CAGAGCGCTT CTGTTAAAAA TCTCCGTGGC AATGGCACGT TTTTCTCGCC CGGTGAGCCT AAGAAAAAAC TGGTGGTGTT TGGCGATTCC ATTGCGCAGG GTTTTGTTGT GGAGCGGCCA GACAAAACTT GGCCGCACTG TCTTGCTAAG CGCATGAAGC TTGATGCGGT TAACCAGGGA ATCGGTGGAC AAGTTTATCA GCCTGGCTCG TATGCGTTCA TTGAGGATGC CTCTTTAGTT GTTGTTGCGC TTGGGGCAAA TTATCGATAC GAGAAATGCT CAAAGTCACA GGTAACATAC GATATTCAAA ATTCACTCTG GCAGATTTCT CAGATGTATG CAGATACGCG CGTGGTGGTT CTGACGCCCA CCCCTTATTT TGAGGATACG TATCCCACGC ACCCTTATTC TTGTTTTGCT GAGGTTCCTC AAATAATTGA AGAGGTTGCT GGTAAGTTTG GTTTGCAGTG CATCTCTGGA GAAAAGCTGT TGCCTCAGGA GAAGAAATAT TTTGCTGACG ATGTGCATCC AAATTCTAAG GGTGCAGCAC TTTTAGCAAA GAATCTGTTT GAAGCCTTAA AACAGCCAGT TCAGGATAGT CTTTTTTAG
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Protein sequence | MEVGEWSISS PASRFLLGAP WSEKLAHGWV HPLRISPNQL RVIGSCSSWH PGLFKQMAAC TSDIQVTFTT DSSEVVLDLK IDELPKGSSS VLQLLKATYL KKLSSVFVTV DGKPYKNFSL DDVGEHTLSI HLETETSEDD LARLPGFNDT HRVNVYLPCL QSASVKNLRG NGTFFSPGEP KKKLVVFGDS IAQGFVVERP DKTWPHCLAK RMKLDAVNQG IGGQVYQPGS YAFIEDASLV VVALGANYRY EKCSKSQVTY DIQNSLWQIS QMYADTRVVV LTPTPYFEDT YPTHPYSCFA EVPQIIEEVA GKFGLQCISG EKLLPQEKKY FADDVHPNSK GAALLAKNLF EALKQPVQDS LF
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