Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0449 |
Symbol | |
ID | 8413298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 517328 |
End bp | 518323 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645022017 |
Product | 2-keto-3-deoxygluconate permease |
Protein accession | YP_003179471 |
Protein GI | 257784254 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00793] 2-keto-3-deoxygluconate transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGCTG AACAGCAGAA AGCAACTCGT AAAATTGGTG TCCCCAGGTT CCCCGGCGAT ATTATGCTTT ATCCGCTTTC TGTGGGCCTG TTGCTCCATT CTTTTTTCCC ACAGGTTTTA GAAATTGGTA GTTTTACTAC GGCTGTTGCT AAGGGCGCTC CTGCTATTGT TGGTATTGTT TTACTGTTTG TTGGCGCTTC TATTGATCTT AAGACTGTTC CCAAGGTTCT GAAAACTGGT CTGACCATCC TGATTCCTAA GCTTGCTATT GCTATTGCCT TTGGTCTCTT TGTTGCTAAA TTTATGGACG ACAATTTCTT TGGTCTTAAT GCACTTTCTA TTATTGGTGG CATTACTTTT TGTAATGTTG CCCTGTACAT TGGTATTACA GCTGAGTATG GTACTCCTGA TGAGCAGGGT GCTGCTGCAG TTTTATCTCT TGTTGCTGGT CCTGCAGTTA CCATGATTGC TCTAGGCGCA GCGGGTGTTG CAGCAATTTC TCCTACCGCA CTTATTGGCA CACTGCTTCC TCTTGTTCTT GGTGTTGTTC TTGGTAACCT TAGTCCATTT ATCAGGTCAC TTTTGGTTCC AGGCATTAAC CCTTGTATTG CTGTTGTTGG TTTTGCCCTT GGCTGCGGCA TGAGTGTTGA GAATCTTATT ACTGGCGGTC TATCAGGTAT TCTTTTAGCA GTTCTTTGTA TCATCGCAGG TATTCTTACC ATGCTTGTTG AACGTCTTCT TGGCGGTTCT GGTAAGGCAA GTCTTGCTAG TGCAACTATT GCAGGTACCG CAACAACCAC ACCTGCTGCG GTTGCTGCTG TTGATCCAAC CTACACTGCT CAGGTTGTTG CTAACGCAAA CGCTCAGCTT GCAGCTGCTG TAGTTATTAC TGCACTGGTA GCTCCTGCAT TCACTGGTTG GCTTGATAAG AAGTTGGCAA AGAAAAATGA TGACGCCGAG ATGCAGACTT CAGAAGAAGT ACCTGCTACT GAGTAA
|
Protein sequence | MAAEQQKATR KIGVPRFPGD IMLYPLSVGL LLHSFFPQVL EIGSFTTAVA KGAPAIVGIV LLFVGASIDL KTVPKVLKTG LTILIPKLAI AIAFGLFVAK FMDDNFFGLN ALSIIGGITF CNVALYIGIT AEYGTPDEQG AAAVLSLVAG PAVTMIALGA AGVAAISPTA LIGTLLPLVL GVVLGNLSPF IRSLLVPGIN PCIAVVGFAL GCGMSVENLI TGGLSGILLA VLCIIAGILT MLVERLLGGS GKASLASATI AGTATTTPAA VAAVDPTYTA QVVANANAQL AAAVVITALV APAFTGWLDK KLAKKNDDAE MQTSEEVPAT E
|
| |