| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0444 |
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| Symbol | |
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| ID | 8413293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 513344 |
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| End bp | 513901 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645022012 |
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| Product | Uracil-DNA glycosylase superfamily |
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| Protein accession | YP_003179466 |
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| Protein GI | 257784249 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGTAA AGAAGCCTCA GCCTGCCGCC GATACTGCAA AAACTACACT TACGCATGTA
GAAAACACGC TTGACCCCAT TATTTTTCCC GACTCTCGCG TATTGCTTTT GGGATCCATG
CCTAGTCCCA AGTCCCGAGA AATTGGTTTT TATTTTGGCA ACCCTCAGAA TAGATTCTGG
CGTGTAGTTG CCACGTTGTA TGGTGAGAAA CCCTTGCAGT CCATACCTGA AAAGATTGAC
TTCTGTAAAA GACATCATCT TGCTCTTTGT GATGTTCTTA AGGCTTGTGA CATTAAGGGT
GCAAGTGACG CCTCTATTGC AAATCCAGTT CCGCACAATA TTGGCGCTCT TATTCAAGAT
TCATCAATCT GTGCTATTTT TACGCTTGGT GGGACAGCAA CAAAATTTTA TAAACGCTAT
ACTGAGCAGC AAACTGGTAT TCTTGCACGT CAATTGCCTT CCACGAGTCC TGCTAATGCA
CGTATGTCAG TTGATGATTT AGTGGAAGAA TTTTCCATTA TCAAAAAATT TACCAATTGT
GAGTTGACAA TATCCTAG
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| Protein sequence | MAVKKPQPAA DTAKTTLTHV ENTLDPIIFP DSRVLLLGSM PSPKSREIGF YFGNPQNRFW
RVVATLYGEK PLQSIPEKID FCKRHHLALC DVLKACDIKG ASDASIANPV PHNIGALIQD
SSICAIFTLG GTATKFYKRY TEQQTGILAR QLPSTSPANA RMSVDDLVEE FSIIKKFTNC
ELTIS
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