| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0435 |
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| Symbol | |
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| ID | 8413284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 503556 |
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| End bp | 504542 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 645022003 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179457 |
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| Protein GI | 257784240 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.490211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGC AGGAATCAAA TCTTGACCAT GATACTTTAC TTCCTCTGAA TGTAAAAAAG
GTAAGTAGAT CATACAGGAT AAAAGAAGGG AAACGTATAG TTTTAGATAA TGTGTCGTTT
TCTGTTCATT TGGGGGAAAT AGTTTGTGTG CTCGGACCGA ATGGTGCTGG AAAGACCACT
TTAGTAAAAA TTGCTTCATC GCTTTTACTC CCAGATTGTG GAGAAGCAGA AGTATGTGGT
GTAGACGTTC TTAAATATCC TCGCAAGGCT TGTAAGAATA TTTCTTTAGT TCTTGGTGGA
GAAAATGGGT TTTATCTTCA CGCTACTGCT ATTAATAACT TAAGATATTT TGCGCAAGTG
AGTGGTGTTC CTTTTGATGA GCAAGAATCA AGAATTAAAA ATGCCCTTCA ACAAGTACAT
TTAGTTGAAT TTTCAAATCA AAATGTATCA ACTTTTTCTA GGGGAATGAG ACAAAGGCTC
CATCTTGCAA GAGCTTTAAT TTCAGCTCAT AGTTTAATTC TTCTTGATGA GCCAACATCT
GGTTTAGATC CAAATAATGC CGCAGATGTT AGACAACTTA TCGCCGAGTT ACGTCACATT
CCTAGTGGTA TTTTACTTAC GTCTCACAGT ATGAGAGAGG TTGAATTATT AGCCGATCGA
GTGCTTATTC TCAAAAAAGG AAAGTGTATT TTTCTGGGCA GCTTAGAGGA GTTGAGACAG
AAAGTAATAA TAGAGGGCGT ATACACGTTT ATTACTAATT GTCTAGATGA ATCTAAAGTT
AAAATTTTAA AGGAATGTTC TGGGATTGCA TCAGTCGAAG TTTTTGAGAA GTTTGATTCA
ATTTATGTGG ATGTGTCAGG AAATAAGAAA ATGATTTTTG ATTTATGTGT TGATGATTTT
GGTTGGAAGA ACGTCAATGA AAGACGTGCC TCACTCGAAG AGGTGTACCT TGCTATAATG
GGAAAAGATG ATGAAAGACA GTATTAA
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| Protein sequence | MIQQESNLDH DTLLPLNVKK VSRSYRIKEG KRIVLDNVSF SVHLGEIVCV LGPNGAGKTT
LVKIASSLLL PDCGEAEVCG VDVLKYPRKA CKNISLVLGG ENGFYLHATA INNLRYFAQV
SGVPFDEQES RIKNALQQVH LVEFSNQNVS TFSRGMRQRL HLARALISAH SLILLDEPTS
GLDPNNAADV RQLIAELRHI PSGILLTSHS MREVELLADR VLILKKGKCI FLGSLEELRQ
KVIIEGVYTF ITNCLDESKV KILKECSGIA SVEVFEKFDS IYVDVSGNKK MIFDLCVDDF
GWKNVNERRA SLEEVYLAIM GKDDERQY
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