| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0433 |
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| Symbol | |
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| ID | 8413282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 500625 |
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| End bp | 502040 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022001 |
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| Product | peptidase S1 and S6 chymotrypsin/Hap |
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| Protein accession | YP_003179455 |
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| Protein GI | 257784238 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000434978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAACA AAACATATAG TTTAACCACA GATTCCGTTG TTTATAAGCG TTTCTCGCCA
GTTAAGCGTG ATGGGTTTAT GTCTAAGCTT CGTAGCTCAA GCATAAAAAG AACAGCTTGT
GCAATTGCCT TTGCTGTTGT ATGCGTTCCT ACAATTGCTT TGGGAGAGGG AGTTGCTAAA
CTCCCTGCAG TGTCTGGTCA GGCAACTATT TCTCAAGCAG CGGCTCGTCC TGCTGCAGAA
CCAACTGACA CCAAGACGGC AGAAACGGTA GCTTCTAAGG TTTTGCCTTC GGTCGTTTCT
GTTAAAGCTA CTAGTGATTC ATCTGGTTCA ACCGGTTCTG GAGTTGTGTT GAACACAAAT
GGAGATATTC TTACTAATTA CCACGTTATC GAGGGTATGG ATACCTTCTC TATTTCAATT
AATGATAAAG AATATGACTG CACCGTTGTA GGTACAGATC CTACCTCTGA CCTTGCTGTC
CTTCATGCTG ACCTCAAGGG AGATAGTGTA ACCCCAATTG AGATTGGCAA TTCCGATAAC
CTGGCCCCTG GTAGTTGGGT TATGAGTGTT GGTAGTCCGT TTGGCCTTGA TCATTCTGTT
TCTGCAGGTA TTGTATCTGC GCTTTCTCGT GGCGATATGC TTGAAACAGA AGGTGGAGAA
ACCACTATTT ATGCCAACCT CATCCAGGTT GACGCTGCTA TTAACCCAGG TAATTCTGGC
GGTGCTTTGG TTGACTCTAA TGGTCAGCTT GTAGGTATTT GTACGCTGTA CTCGTCTGAC
ACTAAGTCGT TTGCTGGTAT TGGTTTTGCA ATTCCTATTA ACTATGCCAT TGATATTGCA
AATCAGATTC TTTCTGGTCA GCCGGTAAAG CATGCTTATA TTGGTCTTTC TATGCAGACT
GTTACTCCAC GAGCTGCAAA GCGCAATAAT CTTTCAGTAG ATTATGGTGC CTATGTGGCA
GGTCTTCTCG ATGATAGTCC TGCAGGAAAC GCCGGTATTA AAAAGGGAGA TGTCATTATC
TCTATTGGTG GAGAGCGCGT AATTTCTGCT GATGCAGCTA TCATTGCCGT TCGTTCTCAT
AAGGTTGGAG AGACAGTTCC TGTAGAAATC ATGCGTGGAG AAGACCGTCT TACCATCAAT
GTCACTCTTG GTTCTGATGA GACGCTTTCT TCTATGAAAG ATAAAGAAAA GAATAACAAG
AACAATACAA ACGACACTGA TGATAAACAG GATCGTACTG AGGATGATGA TGATTCCTAT
AGACATTATC GTCAGCAAAA TTGGTGGCAG GAATTCTGGG ATTACTTCAC TAATCCTTAT
GGAGACAGCG ATACTGATTC CGATAATCCA TTTGAGAATT TTGTAGAGAG TATTACTAAT
AGCATTGCAG AAGCAATTTA CGGAATTTTT GGTTAA
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| Protein sequence | MENKTYSLTT DSVVYKRFSP VKRDGFMSKL RSSSIKRTAC AIAFAVVCVP TIALGEGVAK
LPAVSGQATI SQAAARPAAE PTDTKTAETV ASKVLPSVVS VKATSDSSGS TGSGVVLNTN
GDILTNYHVI EGMDTFSISI NDKEYDCTVV GTDPTSDLAV LHADLKGDSV TPIEIGNSDN
LAPGSWVMSV GSPFGLDHSV SAGIVSALSR GDMLETEGGE TTIYANLIQV DAAINPGNSG
GALVDSNGQL VGICTLYSSD TKSFAGIGFA IPINYAIDIA NQILSGQPVK HAYIGLSMQT
VTPRAAKRNN LSVDYGAYVA GLLDDSPAGN AGIKKGDVII SIGGERVISA DAAIIAVRSH
KVGETVPVEI MRGEDRLTIN VTLGSDETLS SMKDKEKNNK NNTNDTDDKQ DRTEDDDDSY
RHYRQQNWWQ EFWDYFTNPY GDSDTDSDNP FENFVESITN SIAEAIYGIF G
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