| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0411 |
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| Symbol | |
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| ID | 8413260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 474447 |
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| End bp | 476042 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645021979 |
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| Product | Ferredoxin hydrogenase |
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| Protein accession | YP_003179433 |
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| Protein GI | 257784216 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0687694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGGCA CAATGCGAGG TGTATATACC AACCTGACTG AGATTCGCAG GAAGGTATTT
AAAGAGGTTT CGACGCTTGC ATACGAAAAA GCAGACAAGA GCGTCGATGA AATTGCTCGC
CAGATGGAAG AGCTGCCTTA TAAGATTATT CCTGGTGATA TTGCAACTTA CCGTGAGAGC
GTCTTTTTGG AACGCGCTAT TGTTGGTGAG CGTATTCGCA TGACTATGGG TATGCCTATG
CAGGGCGTAG ACCAACCCGA GAATATCTCT GATGGTTTAG AAGAAGCTTC TCGACCAGAG
GTTTATTATC AGCCCCCTCT GATCAACATT GTTAAGTTTG CCTGCAACGC ATGTGAAGAC
AATGTTTATC GCGTTACTAA TGCTTGCCAG GGCTGTCTTG CACACCCTTG TCGAGAAATC
TGTCCTAAAG AGGCAATTAG CTTTGTAGAC AAAAAAGCAT ATATTGACCA GGAGAAGTGT
ATTCAGTGCG GTATGTGCTT TAAGGTTTGT CCTTATCAGG CAATCCATCA CCACGTACGT
CCTTGCGCCG CTGCTTGTGG CATGGACGCC ATTGGCTCCG ATGAGCACGG CCGCGCAGAC
ATTGATTACG AGAAGTGCGT ATCTTGTGGT CAGTGTCTTG TTAACTGTCC CTTTGGTGCA
ATTGCCGATA AAAGCCAAAT TTTCCAAGTA ATTCAGGCTA TCAACGAAGG CTACACGGTT
GTTCCAATTG TGGCTCCTTC GTTTGTTGGT CAGTTTGGCA AGGGTAGTGT TGGTCGTCTT
CGTGAAGCCT TCAAGGAGAT GGGTTTTGCT GAGGTAGAAG AGGTTGCAAC TGGTGCTGAC
CTCTGTACCG TTCAGGAAGC AGAAGACTTT GTCAAAGAAG TTCCAGATAA GCTACCATTT
ATGGGTACAA GTTGCTGCCC TTCTTGGTCT GCAATGGCCA AAAAAGAGTA CCCAGAGCAT
GCTGATGCCA TCTCTATGGC ACTTACTCCA ATGGTTTTGA CTGCTCGTTT GGTAAGAAAA
CAAAATCCAG AGTCTAAGAT TGTCTTTATT GGACCATGTA CTGCTAAGAA ACTTGAGGCA
CTGCGTCGGT CCGTTAAGTC CGAGGTTGAT TTTGTTCTGA CTTTTGAAGA GCTTGCAGGA
ATGATGGAGT CTAAGGGCAT TGACTACACC AAGCTTGATG ACGACAATTC CGACTTTGAA
AATGCTTCTC ATGATGGCCG TGCCTTTGCA GTTGCAGGCG GAGTCGCAGG TGCAGTAGTA
AACGTCATTC ATCAGAAGTA CCCTGATAAA GAAGTGCCTA TCATGGCTGT TGACGGTCTT
GCTGAGTGTC GAGCTATGCT TAAGGATGCC GTTAAAGGTA AATATCCAGG CTATCTTCTT
GAGGGTATGG CCTGTCCAGG AGGATGTGTT GGTGGCGCTG GTACTTTAAG TGCAGTTAAC
CGTGCTGCAG CAGCAGTTAA GCGCTATGCA AAGACCGCTT CTTCCGAATT TGCTTCTGCT
AATAAGTACA ATAATCTTAT TCCAGAACTT GCTGGCACTG TCTCTGCCGA GGTTGAGATT
GCCGAGGTTC TTGAGGTTCA GAAACCTGTT GAGTAA
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| Protein sequence | MPGTMRGVYT NLTEIRRKVF KEVSTLAYEK ADKSVDEIAR QMEELPYKII PGDIATYRES
VFLERAIVGE RIRMTMGMPM QGVDQPENIS DGLEEASRPE VYYQPPLINI VKFACNACED
NVYRVTNACQ GCLAHPCREI CPKEAISFVD KKAYIDQEKC IQCGMCFKVC PYQAIHHHVR
PCAAACGMDA IGSDEHGRAD IDYEKCVSCG QCLVNCPFGA IADKSQIFQV IQAINEGYTV
VPIVAPSFVG QFGKGSVGRL REAFKEMGFA EVEEVATGAD LCTVQEAEDF VKEVPDKLPF
MGTSCCPSWS AMAKKEYPEH ADAISMALTP MVLTARLVRK QNPESKIVFI GPCTAKKLEA
LRRSVKSEVD FVLTFEELAG MMESKGIDYT KLDDDNSDFE NASHDGRAFA VAGGVAGAVV
NVIHQKYPDK EVPIMAVDGL AECRAMLKDA VKGKYPGYLL EGMACPGGCV GGAGTLSAVN
RAAAAVKRYA KTASSEFASA NKYNNLIPEL AGTVSAEVEI AEVLEVQKPV E
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