| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0401 |
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| Symbol | |
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| ID | 8413250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 462702 |
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| End bp | 464120 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645021969 |
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| Product | FeS assembly protein SufB |
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| Protein accession | YP_003179423 |
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| Protein GI | 257784206 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01980] FeS assembly protein SufB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00776839 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGAGA AAAAGCGATC TGAGGTCGCT GACGTAGACC GCTCGCTCTA CGACTTCACC
AAGTCTGAAG AGGGTTACGA GCGCTACGAT GATGGCCTCA CACCAGAAAT TGTGCGTGCT
ATTTCCGAGA AAAAAGAAGA ACCCGAGTGG ATGCTCCAGA TGAGGTTGTC GGCCCTGGAA
ACCTATCACC AGCGCCAGAT GGCCACCAAC TGGGGACCTT CTATTGCAGG TTTGGATTTG
AACCATATCT CCACGTATGT CTCGCCAAAG ACTCAGCAGG CAAATAGCTG GGACGATGTA
CCTGAGGATA TTAGGGATAC CTTTGATCGT CTGGGCATTC CACAAGCAGA GGCAGAGAGC
CTTGCTGGTG TTGGTGCTCA GTACGATTCT GAGATTGTCT ATCACAACAT GCGTGAGGAA
GTTGCTGAAC AGGGTGTTAT TTACACCACC ATTGAGGATG CTTTGCACGA TTCACAGTGG
GAACCCGTTG TTAAAGAATA CTTTGGCAAG CTGATTCCTC CTTCAGACCA CAAGTTTGCG
GCACTGCACT ATGCTGTGTG GTCTGGTGGT TCTTTTGTTT ATGTTCCTAA AAATGTCACT
CTAGACTATC CTCTTCAGAG CTACTTTAGG CTGAATGCCC AGGGTGCTGG CCAGTTTGAG
CACACGCTTA TTATTGTTGA GGAAGGCGCT GATCTGCACT TTATTGAGGG CTGTTCTGCA
CCTAAGTACT ACGCAGCAAA CCTTCACGCT GGAGCTGTTG AGCTCTTTGT TAAGGACGGT
GCGCGGCTGC GTTACTCGAC CATCGAAAAC TGGTCAAAGA ACATGTACAA CCTCAATACC
AAGCGCGCCA TCATTGGCAG TAACGCAAAG ATGGAGTGGG TCTCGGGCTC TTTTGGCAGC
CACGTTTCGT ATCTCTACCC TTCTACCATC ATGAACGGAG ATTCTTCTAA CTGCGAGTTC
ACTGGTATTA CGTTTGCAGG AGCTACTCAG GACCTGGATA CAGGTTGTAA GGTGATTATT
AACGGCTCCA ACAACTCGGC AAACGTTGAC ACTAAATCCA TCTCCAAGGA TGGCGGCGTC
AACACCTTCC GCTCCGCAGT TACTGTTGGT CGCAAGGCAG AAAACGCTCG CGTGGCGTTC
TCGTGCCAGT CGCTAATGCT AGACAACATC AGCCGTTCTG ATACCATCCC AGAGATGGAC
GTCCGCAATT CAACTGCTCA GATTGGCCAT GAGGCAACTA TTGGACGTAT TTCTGACGAC
ACCGTTTTGT ATTTGATGAG CCGCGGTTGC TCTGAGGCCG AAGCCCGCAC CATGGTAGTA
AACGGATTTG CAAACCCTGT CTCAAAAGAG CTTCCTATGG AGTACGCCGT TGAGATGAAT
AACCTTATTA AACTTGAGAT GGAAGGAGCG ATTGGCTAA
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| Protein sequence | MSEKKRSEVA DVDRSLYDFT KSEEGYERYD DGLTPEIVRA ISEKKEEPEW MLQMRLSALE
TYHQRQMATN WGPSIAGLDL NHISTYVSPK TQQANSWDDV PEDIRDTFDR LGIPQAEAES
LAGVGAQYDS EIVYHNMREE VAEQGVIYTT IEDALHDSQW EPVVKEYFGK LIPPSDHKFA
ALHYAVWSGG SFVYVPKNVT LDYPLQSYFR LNAQGAGQFE HTLIIVEEGA DLHFIEGCSA
PKYYAANLHA GAVELFVKDG ARLRYSTIEN WSKNMYNLNT KRAIIGSNAK MEWVSGSFGS
HVSYLYPSTI MNGDSSNCEF TGITFAGATQ DLDTGCKVII NGSNNSANVD TKSISKDGGV
NTFRSAVTVG RKAENARVAF SCQSLMLDNI SRSDTIPEMD VRNSTAQIGH EATIGRISDD
TVLYLMSRGC SEAEARTMVV NGFANPVSKE LPMEYAVEMN NLIKLEMEGA IG
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