Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0390 |
Symbol | |
ID | 8413239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 451397 |
End bp | 452161 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645021958 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_003179412 |
Protein GI | 257784195 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTCA AAGCTGATAA AAAAGTAATC GTCGAGCGTA ATAACAAGGT TGTGTATGAC AACGGAGACA CAGTCGTTAA GGTGTTCAGC GGAAGCAAAC CTTCTGCTGA TATTTTGAAT GAGGCTTTAA ACCTCACTCG TGCTGAGCAG GCCGGTATTA ACGTTCCATC TCTTGTAGAG ATTAGTAAGG TTGGTAATTG CTGGGCCATT TCAACTAGAA AAGTTGAGGG TAAAACAATA AGGCAGCTTA TTGAAGAGCA TCCAGAAAAA GAGGATGAGT ATCTCAATAA GTTTGTTAAT ATCGAGCTGG CTATTCATGC ACATAAAGCA CCACTTCTGA CTCGTCAAAA AGATAAGTTC ACCCGAATGA TTAACAGCAT TCCAGACATT CTTGATGAGG CTACAAGGTA TGAGCTCCTG CTTAAGCTTG ATGGCATGAA GCCTCATACT AAGGTCTGTC ACGGTGACTT TGTACCTTCT AATGTTATTC TCGCTGAAGA TGGCGCTCCC GTAATTCTTG ACTGGGCACA CGCAACTCAG GGCAATGGTG CTGCAGATTG CGCTACAACG TATCTGCATT TGCTTCTTCA TGGTGATGAA GAGCTTGCCG AGAAATACAT CAATCTTTAT TGCACCAAGC AGGGATGCAC GCGTCAGTAT GTAAACGAAT GGCTTGGCAT TATCGCTGCA GCAGAGCTTG CACGCGGTCG TGTGAAAGAA ACAGAATTCC TGCTTAAGTG GGTAAATGTT TTTGATGCAA TGTAA
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Protein sequence | MELKADKKVI VERNNKVVYD NGDTVVKVFS GSKPSADILN EALNLTRAEQ AGINVPSLVE ISKVGNCWAI STRKVEGKTI RQLIEEHPEK EDEYLNKFVN IELAIHAHKA PLLTRQKDKF TRMINSIPDI LDEATRYELL LKLDGMKPHT KVCHGDFVPS NVILAEDGAP VILDWAHATQ GNGAADCATT YLHLLLHGDE ELAEKYINLY CTKQGCTRQY VNEWLGIIAA AELARGRVKE TEFLLKWVNV FDAM
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