Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0379 |
Symbol | |
ID | 8413228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 440259 |
End bp | 441224 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645021947 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003179401 |
Protein GI | 257784184 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.234172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCCCT CTAAAATCAC AGACGGTGCA AAGACTGCAG TAGAAGATGA AGTACTTGGC AGCGATGATG CTGAAATAAC ACCTGATAAC AAAAAGAAAA TTTACCGAGG AATGTTGTTT GTCCTGATTG GAGGGGCTTC CTGGGGTGCA TTTGGAACAG CTGCAAAATA TCTGTTAGAT ACCTATCACG TTGATCCGAT GTGGTTGATT GATATTCGTG AGCTTTGTGC CTGCTGGTTA TTCTTGGGAA CTGCTTTTGC GTTTGATAGA AAAAATCTCA TGACCGTTAT TAGGCAGCCA AAAGAGCTGG CAAAGATTTT TGTGGTTAGT TTGTTTGCTA TTCTTTTCTC TCAAGTTGCT TATATTTATG CAGTTAATGC TACTAATTCT GGAACTGCAA CCATCATGCA GTCGTTGGGC ATGTTGGGCG TTTTGGCCTT TGTCTGCGTG GTTGGCAGGC GTTGGCCTCG ACGCCGTGAG ATTCTTGGCA TTGTTTTGGC GCTTATTGGC ACCTATCTTT TGGTAACAGG AGGAAATCCT GGCAAGCTCA ACCTGCCAAC TGCAGGTATT TTCTGGGGTG TTATGTGTGC TTTTGCTCAG GCAGCTCTTT CTATTTTACC CAAGCCTCTG ATGGAGAAGT GGGGTAGCTT TACTGTTAAC GGATTAGCGT TTCTGTTTTC TGGCATGCTT ATTGCCGTGT TTTATCAGCC TTGGAATCAT ATGCCTCAAC TGGACGCCTT TGGCGTCTTG CTCGTAGTTA TTGGTGTGTT TGTGGGAACC TTTTTGGCGT ACGGCCTCTA CCTGCAGGGC GTTAAGGATG CAGGTTCGCT CAGAGCTGTC CTTCTTGGTA CTGTCGAGCC CCTTATGGCA ACTATTACCA CGGTATTGGT GCTTGGAACC ACCTTTAGCA TCGCCGACCT TATCGGTTTT GCTCTCATTC TTGCGATGGT CGTGCTCACC GCTTAG
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Protein sequence | MEPSKITDGA KTAVEDEVLG SDDAEITPDN KKKIYRGMLF VLIGGASWGA FGTAAKYLLD TYHVDPMWLI DIRELCACWL FLGTAFAFDR KNLMTVIRQP KELAKIFVVS LFAILFSQVA YIYAVNATNS GTATIMQSLG MLGVLAFVCV VGRRWPRRRE ILGIVLALIG TYLLVTGGNP GKLNLPTAGI FWGVMCAFAQ AALSILPKPL MEKWGSFTVN GLAFLFSGML IAVFYQPWNH MPQLDAFGVL LVVIGVFVGT FLAYGLYLQG VKDAGSLRAV LLGTVEPLMA TITTVLVLGT TFSIADLIGF ALILAMVVLT A
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