| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0249 |
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| Symbol | |
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| ID | 8413097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 290763 |
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| End bp | 291941 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021817 |
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| Product | Cysteine desulfurase |
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| Protein accession | YP_003179272 |
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| Protein GI | 257784055 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01977] cysteine desulfurase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.246818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATATC TCAACTGTGC TGCAACGTCA TATAAGCGTC CTCAATGTGT TGTAGATGCT
GTTTCACGCG CCCTTTGCTC ATTTGGAAGT ACGGGAAGGG GTGCAGCGTC TGCCGAGCTT
GATGCTGCTC GCGCTGTTAT GGTTGCACGA GAACGTATCG CTTTGTTGTT AGGTTTTTCA
CATCCAGAGC GTGTCGTGTT TACCGCAAAC GCAACAGATG CCCTAAACAA GGCAATTCTC
GGCATTGTTA AGCCCGGAGA TCATGTAGTT GCAACAGATT GGGATCACAA TTCTGTTTTG
CGCCCTCTGA ATCGTCTTCA AAAGAAACGC AATGTAAAGG TTGATTATGT TCCTGCTAAT
TTGCAGGGCT GCCTTGATTG GGATGTTCTT GAACGATTAG TTTCTCCTGG TACAAAGTTA
GTGGTAGTAA CACATGCATC TAATCTTACA GGTAATGTAT GTGATCTTGA ACGTGTGGTT
ACTGTTGCTC ACGCTGTAGG TGCACTTGTG CTTGTTGATG CTTCACAAAC CGCAGGGTCA
ATACCCATTA ATTTTGATGA TTTAGGTGTT GATGTACTTG CGTTTACTGG TCATAAGGCA
CTTATGGGTC CTCAGGGGAC AGGTGGCCTT TTGGTTGCTC CACATGTTGC GATAGAAGCA
GTTATTCAAG GAGGAACGGG CGTACTTTCT TTTGAAGAGG AAATGCCTCA AGTATATCCA
GAACATCTTG AGGCAGGAAC GCTTAATAGT CACGGTATTG CCGGTCTTTC TGCTGCAGTA
GATTTTGTAT CAACACAAGG AGTATGTGCT GTTCACCGTC ATGATTTAGC ATTGGTTAGA
CAGTTTGTAG CTGAGGCTCG TCAGGTGCCT GGGATAGAGT TATATGGATG TTTTCCTGAT
AACATTTCTG AACTGAATGG GGAGAGTTCG CAAAAAGATC ACGCACCCAT TGTGACACTT
AATTTAGATG GGTGGACTTC TTCAGAACTT GCAAGAGTTT TAAGTGTTGA GTATGACATT
TCAGTTCGTG CAGGAGCTCA TTGTGCTCCT CGTATGCACA GAGCATTAGG AACGCAAGAT
ACGGGGTCGG TCCGTTTCTC ATTTGGATTT TATACGACAG AGGATGAGAT ACATAAGGCA
ACCACGGCCC TTAATGAGCT AGCAAAATCG GTGATGTAG
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| Protein sequence | MIYLNCAATS YKRPQCVVDA VSRALCSFGS TGRGAASAEL DAARAVMVAR ERIALLLGFS
HPERVVFTAN ATDALNKAIL GIVKPGDHVV ATDWDHNSVL RPLNRLQKKR NVKVDYVPAN
LQGCLDWDVL ERLVSPGTKL VVVTHASNLT GNVCDLERVV TVAHAVGALV LVDASQTAGS
IPINFDDLGV DVLAFTGHKA LMGPQGTGGL LVAPHVAIEA VIQGGTGVLS FEEEMPQVYP
EHLEAGTLNS HGIAGLSAAV DFVSTQGVCA VHRHDLALVR QFVAEARQVP GIELYGCFPD
NISELNGESS QKDHAPIVTL NLDGWTSSEL ARVLSVEYDI SVRAGAHCAP RMHRALGTQD
TGSVRFSFGF YTTEDEIHKA TTALNELAKS VM
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