| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0215 |
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| Symbol | |
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| ID | 8413063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 254575 |
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| End bp | 255315 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645021783 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003179238 |
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| Protein GI | 257784021 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.674801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCTAGCA AGTCGCTTAA GAGCCCAGCT GGAAGTTCCG CAAAGAACGC TACAAAAAGC
TTGACTAAAA CTTCATCCAA GAGCCGTACG CTTTCAAAGA AAAAGATTTT CTCGACAGCA
CTTGCTCTTG TAGACGAAAA GGGTCTGTCC TCTCTTTCTC TTCGAGCGCT TGGACAACGC
CTTGGTGTTT CCCAAGCTGC TTTTTATCGG CACGTACCAA ACAAGTCTGC ACTGCTTGAA
GGCGTCTCTG AGGAGGTGCT GAGACGTGCT CTGGAAAGTT TTATCTCTGG TATTGAGCGT
AATACAGAAG TTTATGGTCA AATGAGCTGG CAAAACTACC TACGTGCTTA TGCGGTGTCA
CTACATGACA CGCTTCTACA GCATCCAAAT GCCATTATGT TAGTGCTTAC TCACCCGATT
TCTACTCCTG GACAGCTCTC GCTTTTTGCT AAGATGCTCG CGAATCTTTC AAAAACTGGC
TTTTCTGCAC CTTTAGATAT GCTTGGAATT GCAACCGCTG TTACGGTATA TACCACGGGT
TTTTCTGCTT CGGAAGCTGT ACCTCCTGTG GGAAGCACCT CCGAAGAAGA TGCTCCTAGT
CTCTCTGAAG CAATTGAATC TCTGCCGGCT GATGAGCTTG ATTCACTCAG TATGCTCATT
GGAGATATAA TGGAGGGCAA ATGGAACTTC AGTACGCAAT TTGAAAGAGG GCTTGACGCC
CTTCTTCAAG GATGGAAATA A
|
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| Protein sequence | MPSKSLKSPA GSSAKNATKS LTKTSSKSRT LSKKKIFSTA LALVDEKGLS SLSLRALGQR
LGVSQAAFYR HVPNKSALLE GVSEEVLRRA LESFISGIER NTEVYGQMSW QNYLRAYAVS
LHDTLLQHPN AIMLVLTHPI STPGQLSLFA KMLANLSKTG FSAPLDMLGI ATAVTVYTTG
FSASEAVPPV GSTSEEDAPS LSEAIESLPA DELDSLSMLI GDIMEGKWNF STQFERGLDA
LLQGWK
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