| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0148 |
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| Symbol | |
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| ID | 8412994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 169275 |
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| End bp | 169982 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645021718 |
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| Product | putative transcriptional regulator, TetR family |
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| Protein accession | YP_003179175 |
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| Protein GI | 257783958 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAA CAATGTCTGT ACCTGCTGTT TTGTCAGTTT GTAAGCTTGA TCGACGCACT
GCTAGAACGC GTGCGGCACT CAGAAAGGCC CTGGCAGAAG AGATAGACGC TACCGGCGAT
CTTACCTCTG TGACTGTTAC GGGCGTAACG GAGCGCGCCG GCCTTACGCG TCGAACCTTT
TATTCCCACT ACAAAGACAT CCCTGATTTG GTGCTTCACA TTGAAAAGGA AGCATTAGCA
GAGCTTCGGC CTGCTGTTGA GCAGCTTGCT CGCGTCAACC TTGCCGAACT CAGGGAGGCA
ATCGACTCCT ACAAACCATG CCCTGGCGCA ACTGAGATGC TCCGTAGCAT TCGTAAGCAC
GGCTTCTACC TGCGTCCTTT GTTGGGCAAC GGTGGAGACC CTGCGTTCCA GGAAAAGCTT
AAGCACCTGG TGCACGAGGT TATCGCTCAG CGTGCCTTAC ACGACCTTGA CCCACGCGCA
CTTGGTTCTT TCTTTGACTA CTATCTGACC TTTGCAATTT CTGCTGAGGT TGGCGTCCTT
ATCCGCTGGT TAATCGGCGG CATGCGCGAG AGCGACGAGC AGATGGCGGG TCTTATGACC
GGTCTCATGT TTGTTGCACC TGGCGATTTG TACGGCAAGC CAATTAAGCT GGACGTTCCA
CGATTTGCGC TTGCAACTCT TGTTCTTGGA GAGGAAAACA ATGATTAG
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| Protein sequence | MTQTMSVPAV LSVCKLDRRT ARTRAALRKA LAEEIDATGD LTSVTVTGVT ERAGLTRRTF
YSHYKDIPDL VLHIEKEALA ELRPAVEQLA RVNLAELREA IDSYKPCPGA TEMLRSIRKH
GFYLRPLLGN GGDPAFQEKL KHLVHEVIAQ RALHDLDPRA LGSFFDYYLT FAISAEVGVL
IRWLIGGMRE SDEQMAGLMT GLMFVAPGDL YGKPIKLDVP RFALATLVLG EENND
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