| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0129 |
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| Symbol | |
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| ID | 8412974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 146099 |
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| End bp | 147838 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645021698 |
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| Product | UbiC transcription regulator-associated domain protein |
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| Protein accession | YP_003179156 |
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| Protein GI | 257783939 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.625714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTTG AGACAGGAGT TTTTCCGGTT TTAGTTTCTG AGGATGAAGC TGTAGAGTCA
CTGCCTCCAC AGGTTAGGGG AGGGCTCAAT GCGTCATCTG CTACGCCTCT TCATGTTCAG
CTGTCAGATT TAATGCGCGT TAAAATACTG TCAGAAGACT GGAAGGCAGG AACGTATATT
CCTTCTGAGG CCGAATTTAT GGCGCAGTAT GGTGTTAGTC GAGGCACTAT CAGAAAAGCC
ATTCAATCTC TGGTTAAAGA AGGTTTGCTG CTTACTCAAA AGGGTCGAGC AACACAAGTT
ATTTCTAACA CCGTTCGACA TGCAGCAGGA AATACCGTGC TTTCATTTGC CGCAGCGCTT
AGAGATGGTG GATTTGAATA TCGAACCGAA GTCTTGTTTA AGCAGGTGGT TCCTGCAGAT
CAAGCTGTTG CCGAGCATCT AGAGATTCCC ATCGGCTCTG ACGTGCTCTT TTTGCGTCGT
GTCAGGAGCG TTTCGGATAG ACCTGTGGTA TGCCAGGAAT CATGGTCTAA CCTGCTTGTT
TGTCCACAGC TCGAAGAGGC GGACTTTGAG AATGAGTCGC TCTTTGATGC AGTTGAAAGA
ATATCCAAAA AAGAAATTGC ACGTTCTCGC ATGCGCTATC AGTCGCAAAT TGCGGATAAA
GACCACGCAG ATTACCTGCA GTGTTCTCCA AATGAGGCTT TGCTTGTACT TGAGCAGGTA
ATTGAGCTGT CCGACGGCAA CTGCATTGAG TGGAGCCAGA CTTGGCTTGC TCCACACCAG
AGTGTTGTTG GTGTATCAGA GCAGGTAGAT GGCTCTATTG GACCTCTGGA CATTTCTTCG
GTCCGCCAGT CAGAGCACTC TACCTCCAAT ATTGTTGCTT TAAAAAATGA TATCAAACAG
CGCACGCAGC TTGAACTTGA TTTGCGTCAC GAAGCACTGT CAGTACGTCG AGGCATCGTT
GAGCTGGCGC ATCGCTACAG TTCAACGCCA TTTCACATTG GCGGTGCATG TTCTGTAGCA
GACATAGTCT CCGTACTCTT GAGTAAGGTT ATGCAGGTAG GAAATAGGGA TTGCGAGTGG
GAACTCAGAG ACCGCCTGAT TCTGTCCAAG GCTCATACGT CGCTGGCGCT ATTCCCAGCA
CTTCTACGTG CAGGAATGAT CTCCCAAGAG GATATTGATC GCGGAGTTTT TGGACCTGAT
GCCGTCCTTT TTAAACATCC TCTGCGAGAT TCTCAACGTG GTTTTGAAAT CTCTGGTGGC
AGTCTTGGCA TGGGCCTGGG CTACGCCGCT GGGCTAGGGT TAAGTTTTCG CAGGAAAGAT
CTTCCTTCTC GCGTTTTTTG TATTTTGGGC GACGGTGAGT GCGATGAGGG TTCCATTTGG
GAGAGTGCAG CGTTTATCGG TCACAACCAG CTCTCCAACG TGACGGTGAT TGTTGATCAG
AATCGTATGC AGCTGGATGG CCCTTGCGCG TCCATTTTGG ATACCGGATC AATTGCAAGA
AAGTTTGATG CGTTTGGCTT TGAATCCATT GAGGTAGATG GTCATGATGT GCTTGCATTG
TACGACGCGC TGAAAGAGAA AGCTTCCAAG CCTCGCGTGA TTATTGCACA CACCATTAAA
GGTAAAGGGT TCTCGTTTGC CGAGAATAAC GTCTCGTTCC ATGATGCATG TGTGACGGAT
GACCTCTATG AACAGGCATT GTCTGATCTG AAAGTTGCAG AGGAGGCGTG TTCATGCTAG
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| Protein sequence | MSFETGVFPV LVSEDEAVES LPPQVRGGLN ASSATPLHVQ LSDLMRVKIL SEDWKAGTYI
PSEAEFMAQY GVSRGTIRKA IQSLVKEGLL LTQKGRATQV ISNTVRHAAG NTVLSFAAAL
RDGGFEYRTE VLFKQVVPAD QAVAEHLEIP IGSDVLFLRR VRSVSDRPVV CQESWSNLLV
CPQLEEADFE NESLFDAVER ISKKEIARSR MRYQSQIADK DHADYLQCSP NEALLVLEQV
IELSDGNCIE WSQTWLAPHQ SVVGVSEQVD GSIGPLDISS VRQSEHSTSN IVALKNDIKQ
RTQLELDLRH EALSVRRGIV ELAHRYSSTP FHIGGACSVA DIVSVLLSKV MQVGNRDCEW
ELRDRLILSK AHTSLALFPA LLRAGMISQE DIDRGVFGPD AVLFKHPLRD SQRGFEISGG
SLGMGLGYAA GLGLSFRRKD LPSRVFCILG DGECDEGSIW ESAAFIGHNQ LSNVTVIVDQ
NRMQLDGPCA SILDTGSIAR KFDAFGFESI EVDGHDVLAL YDALKEKASK PRVIIAHTIK
GKGFSFAENN VSFHDACVTD DLYEQALSDL KVAEEACSC
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