Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0120 |
Symbol | |
ID | 8412964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 134833 |
End bp | 135429 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645021688 |
Product | transcriptional regulator, BadM/Rrf2 family |
Protein accession | YP_003179147 |
Protein GI | 257783930 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000213431 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.090725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATTT CACGCAAAAC TGACTATGCA ATTCGTATGC TTTCTTCGCT GGTGAGAAAC CCTAAGAAGC TTCTTTCTGT TCGTGATGCC GCGGAAGAAA ACGATATTCC GTACTCCTTT GCTCGCTCAA TTCAGCATGA CCTGGTTATC GCTGGTGTAA TTGTAAGTAC GCGTGGTGCT CGCGGTGGTA TGATGCTTGC CATAGATCCT ACTCAGGTGA GCGTTCTTGA CATTGTTGAG GCAGTTCAGG GACCTGTTTT TATTTCTAAC TGCGAGTGGG CAGGTCCTAA TAATGAGCCA TGTCCTCGCC ACAATTCTTG TTACTTTGGC CCCCTTTGGT GCAGTGCTGA GAAAACCTTG CGTAATTTCT TTGCGTCTGT GACGCTGCAT CAAGTTGTTG TAGAGGGTCT TATGCCAGAG ATGGTGGGTG AATTCCAGCT GGTGAAGAAC GAGAATGCTC AGCGTAACGA GCAAATTATT CAAAACGCTG CCGATGCTAT TGAGGCTGAG ATAACCGCTG GTACGTTTGA TAATCTGCTT GACGGCGAAG TTGTTTCTGC AGAGAAAAAG CCTTATGAGT TTAATAGAGC ATGGTAA
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Protein sequence | MEISRKTDYA IRMLSSLVRN PKKLLSVRDA AEENDIPYSF ARSIQHDLVI AGVIVSTRGA RGGMMLAIDP TQVSVLDIVE AVQGPVFISN CEWAGPNNEP CPRHNSCYFG PLWCSAEKTL RNFFASVTLH QVVVEGLMPE MVGEFQLVKN ENAQRNEQII QNAADAIEAE ITAGTFDNLL DGEVVSAEKK PYEFNRAW
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