| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0119 |
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| Symbol | |
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| ID | 8412963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 134044 |
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| End bp | 134757 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645021687 |
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| Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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| Protein accession | YP_003179146 |
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| Protein GI | 257783929 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000400181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0929396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAG AATCTTCAAT CACAGAATCC ACTTCAGATT CAATCAAGAA AATTGCTGTT
TTTGATTTTG ACGGAACCGT CATTTCTGGA CAGTCGGGAT TCTTGTTCTC TGCGTATTTG
CTTCGTCGCC ATCTGTCTTC AGTTTCTCGT ACGTTAAAGC TCATGTGGTG GGGAGCGCGC
TATAAATTGC ACCTTCCTCA GAGGCAGGAG GAGGCACGCG AGCTGGTTGT TGGCGCACTT
ACGCAGTACA GCATTGAGTT TGCAAATGCT GTCATGCACG ATTTTCATCG TGAGGTGATT
GAGGGTATGT ATCGCCCTCA GGCACTGGAA GAGGTGCGTC GTCGGCAGGC AGAAGGTTGC
TGCGTATTGT TGGTTTCAGC AACATTTGAG CCTATTGCGG AGTTGGCCGC AAAGAAGCTG
GGAGTGGACG CGTTTCTCGC CACAAAGATG CAGGTGGGAG CAGATGGACA CTATACCAGT
AAGGTTGACG GTCCTGTGAT TGAAGGCGCT CAGAAGTTGG TCTCGGCAAC CGAGTGGTGC
AACCAGCATT ATGGCAAGGG TAATTGGGAG CTTGCATACG CGTATGGCGA CCATTACTCG
GATGCAACAC TTTTGTCAGC AGCACAAACA CCATGTGCTG TTTGCCCTGG TCCAACACTT
ACCAGGCTTG CGAATAAGCG CGGTTGGACA ATTTTGAACT GGGAGAACGA TTAA
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| Protein sequence | MPAESSITES TSDSIKKIAV FDFDGTVISG QSGFLFSAYL LRRHLSSVSR TLKLMWWGAR
YKLHLPQRQE EARELVVGAL TQYSIEFANA VMHDFHREVI EGMYRPQALE EVRRRQAEGC
CVLLVSATFE PIAELAAKKL GVDAFLATKM QVGADGHYTS KVDGPVIEGA QKLVSATEWC
NQHYGKGNWE LAYAYGDHYS DATLLSAAQT PCAVCPGPTL TRLANKRGWT ILNWEND
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