| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0117 |
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| Symbol | |
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| ID | 8412960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 132168 |
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| End bp | 132779 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645021684 |
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| Product | recombination protein RecR |
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| Protein accession | YP_003179144 |
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| Protein GI | 257783927 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000471102 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0497522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGTTTG ATACCACAAA TGATGGTCGT GCGCTGCAGC GCTTACTTGA TGAGTTAGGT
CGCCTACCAG GCATTGGTCC AAAGTCAGCC CAGCGTATTG CGTATCATCT TTTAGAGGTT
GATTCCGAGG AAGCTCGCCG TTTAGCTCAG GTCATCTTGG AGCTTAAGCA GCAAGTACAT
TTTTGTCCTA TCTGCTTTAA CTATGCAACG CGCAACGAAT GCGATATCTG CCTGGATTCT
TCTAGGGACC GCAGCAAAAT ATGTGTGGTC TCCGAGCCAA AGGATGTCTC AGCAATTGAG
CGTACTGGTG CGTTCCACGG TCTCTACCAC GTTCTGGGAG GCGTTATTTC TCCTATGGAT
AAGATTGGTC CCGAGCAGCT TCACGTGCGC GAACTGCTGT CTCGTTTGGC TGATGGCACC
GTAACCGAGG TTGTCTTGGC AACCAATCCG GATGTTGAGG GAGAAACAAC TGCAACGTAC
CTCTCCAGAA CTATTAATCC GCTTGGCGTG AGGGTTACCC GATTAGCAAG TGGGCTTCCC
GTAGGCGGAG ATCTTGAGTA TGCGGACGAG GTAACATTGG GACGCGCAAT TGAGGCGCGT
CGGGAGGTTT AA
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| Protein sequence | MAFDTTNDGR ALQRLLDELG RLPGIGPKSA QRIAYHLLEV DSEEARRLAQ VILELKQQVH
FCPICFNYAT RNECDICLDS SRDRSKICVV SEPKDVSAIE RTGAFHGLYH VLGGVISPMD
KIGPEQLHVR ELLSRLADGT VTEVVLATNP DVEGETTATY LSRTINPLGV RVTRLASGLP
VGGDLEYADE VTLGRAIEAR REV
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