| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0115 |
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| Symbol | |
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| ID | 8412958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 129463 |
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| End bp | 131730 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645021682 |
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| Product | DNA polymerase III, subunits gamma and tau |
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| Protein accession | YP_003179142 |
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| Protein GI | 257783925 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.032481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.138962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAC TGTATACAAA GTATCGTCCG CAAACGTTTG AGCAGGTAGT TGGCCAGAAG
CATGTGGTCG GCACCCTTAA GCGAGCGGTC TTGGAGCAAA AGCTCAGCCA CGCATACCTG
TTTTGCGGAC CTCGCGGCAC GGGTAAGACC ACCATGGCTC GCTTGCTGGC AAAGGCGATT
CTTTGCCATG AGGCGCCTGG TCACTTGCCC GATGGTACTT GTGAGGATTG TCAGCTGATT
GCAGCTGGTC AACACCCAGA TGTCTTTGAG ATTGATGCTG CTTCTAACAC TGGCGTTGAT
AACGTGCGAG AAGAGATTAT TTCTCGCGCT AGCTACGCCC CGGTGTGTGG CAAGGGCAAG
GTTTACATTA TCGACGAGGT GCACATGCTT ACCTCGGCCG CATTTAATGC TTTGCTTAAG
ACGTTGGAGG AGCCTCCTTC ACACGTGACC TTTATCATGT GTACCACGGA TCCTCAGAAA
ATTCTTGCAA CTATTCTTTC CCGTGTGCAG CGTTTTGACT TCCGCTCCAT TGCTGCTGAC
GAGATGGCAG AGCATCTTAT CAGTGTCTGT AAAAACGAGG GTTTTACCTA CGAAGATGCA
GCGATTGATC TTATTGTCCG TTACGCGCGC GGCGGCATGC GTGACGCACT TTCTTCTCTT
GAGCAGCTTT CCGTTTACGG CGGCGGCGTC ATTTCCGAGC AGACGGTTCG TGACGTATTG
GGTCAGTCTT CCGGGTCTCT TATCAATAGT GCCGCGTTGG CGCTGGCTCA GCGAGACATT
TCTTCTCTCT TTACCACGGT AAATACACTG TTTGAAGGTG GCAAAGATTT GCTGCAGTTT
ACGCGCGAGC TTGCTGCTCA TGTGAGAGAC CTCTACGTTG CTACCGCTGT GGGTGTTGAT
TCTCCGGCAT TAGCAAATTC TTCTGCATCA ACCGAGCAGC TTACAAAAGA AGCTCAGGCA
TTTGGTTCGG TTGACCGACT CTCTAGGGTT TTAACCGTTC TGGGTGACGC TGCAAATCAG
ATGCGCACCG CCGTGAACCA GCGACTGGTT TTGGAGGTTA CGTTCACTAA GTTGGCGCGC
CCTAATACGG AACTCTCATT AGAAGCGCTG GCAGATAGGG TGGCGGTCCT TGAGCAGCAG
CTGGCAAATG GTGTTGTTTC AGCTCCAGTT GTCCAGAATT CCGCAGCTCC CGTACACGCG
TCGACTCCAG CCGCCCCAGC GGCTCCACAG CCGACTTCAG CTCCGGCGGC CGCACCAGTT
GTTGCGCACA CGTCAACACC AGTGCCCACA CCAGTTGCTG CACCTGCACC AGCTCCGACG
CAGCAATCTG CACCAGAATT GCCTTCTCAA CCTGAGCCTA AACCAACTGC AGCGACTGTA
CCAGTTTCAG CGCCAGCACC AGTTGCAGCA GCAACGTCAT CACAACCTGC GCCTGTGCCA
AAAGAAGTTG ATCAATCAGA CGCACTTCTC GCCAGACAAT GGAAAGAAGT CAGTAAGGTT
TGTACCTCTA AGAATGCTGC TCATGCCGCA CTATTGGTCA GCTCAACGCT TGAGTCCGAC
GACGGCTCTG AGCTGGTAAT CACACTGCCT AAAGGCTCCT CGTTTGCTAT GAGAATGCTC
AGCACGCCAG CAGTTTCCGA TTTTGTAAAA GAGTGTGTTG CTCAGGTCAT AGGTCCACGC
CGAATCAAAT ATGTTGAGTC GAGTCTTGCT GCAACAGCAA TCTCGCGAGA AAAACGTGCA
GCTCAGGCGG CCCCAGCGCC TACACCAGTC GCTCCTGTGG CTCTAGTTGC ATCATCAGCT
TTCGAGTCGG TTGCGCAGCC CGCTTCTGCA GCCGCTCCAG CTCAAGCACC TGCGTCAGCT
CAAGCATCAG CTCCTGTCGT ATCTATACCT GCAGCTCCAG CACCTGAGAC TTCGTATTCA
ATGCCTTGGG ATGAACCTGT GCCTGGTGGT GCTCCTGTTG AGGCTTCTAA CTACAATCAG
GTGCCTTATA GCGATGATGA TGTAGCTGTG GTTTTGGACG ACTCCGTCAA AGACACCGTT
CCAACTCCAC AACCCACAGC TGCGTCTGTG CCTGAAACCG AGCAAACTTC GACTCCTAAG
TCCGATCCTA TACCAGCTTC GCCAGAGGAC GTTGCTACTC GCTCGGCACT TCCACCTGAG
CTTAACAGTG TGGCAGATAT GCTTGAGAGA GTATTTGGAC CAGCAGTTTC TCTGTCGGTA
GAGAAGAAGC CAGACACAGA AATTCCTGCA GACCCCGCAA GTAAGTAG
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| Protein sequence | MESLYTKYRP QTFEQVVGQK HVVGTLKRAV LEQKLSHAYL FCGPRGTGKT TMARLLAKAI
LCHEAPGHLP DGTCEDCQLI AAGQHPDVFE IDAASNTGVD NVREEIISRA SYAPVCGKGK
VYIIDEVHML TSAAFNALLK TLEEPPSHVT FIMCTTDPQK ILATILSRVQ RFDFRSIAAD
EMAEHLISVC KNEGFTYEDA AIDLIVRYAR GGMRDALSSL EQLSVYGGGV ISEQTVRDVL
GQSSGSLINS AALALAQRDI SSLFTTVNTL FEGGKDLLQF TRELAAHVRD LYVATAVGVD
SPALANSSAS TEQLTKEAQA FGSVDRLSRV LTVLGDAANQ MRTAVNQRLV LEVTFTKLAR
PNTELSLEAL ADRVAVLEQQ LANGVVSAPV VQNSAAPVHA STPAAPAAPQ PTSAPAAAPV
VAHTSTPVPT PVAAPAPAPT QQSAPELPSQ PEPKPTAATV PVSAPAPVAA ATSSQPAPVP
KEVDQSDALL ARQWKEVSKV CTSKNAAHAA LLVSSTLESD DGSELVITLP KGSSFAMRML
STPAVSDFVK ECVAQVIGPR RIKYVESSLA ATAISREKRA AQAAPAPTPV APVALVASSA
FESVAQPASA AAPAQAPASA QASAPVVSIP AAPAPETSYS MPWDEPVPGG APVEASNYNQ
VPYSDDDVAV VLDDSVKDTV PTPQPTAASV PETEQTSTPK SDPIPASPED VATRSALPPE
LNSVADMLER VFGPAVSLSV EKKPDTEIPA DPASK
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