Gene Apar_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0114 
Symbol 
ID8412957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp128907 
End bp129326 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content58% 
IMG OID645021681 
Productribosomal protein L31 
Protein accessionYP_003179141 
Protein GI257783924 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0254] Ribosomal protein L31 
TIGRFAM ID[TIGR00105] ribosomal protein L31 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.434874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.146385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAG GTATTCATCC AGAGTACGTA GAGTGCACCG TTCGCTGCAC CTGCGGAAAC 
ACCTGGACCA CACGCGCAAC TGTTCCAGAG ATGCGTCTTG ACCTCTGCGA CAAGTGCCAC
CCATTCTATA CGGGTCAGCA GAAGCTTGTC GACACTGGTG GACGTGTTCA GCGCTTTGCT
GACAAGTTTG GTGGCGCAGC AAATGCTACT CTCGAGGCCG CTAAGGCTGC CAAGGAGGCA
AAGGCTGCTA AGGCTGCTGA GCAGGAGGCT GCTCGTAAGG CCGCTGCCGA GGCAAAGGCT
GCCGAGAAGG CAAAGCGTGC TGCTGAGTTT GCAAAGAACG CACCAGTCGC AGAGCCAGAG
CCAGAAGCTG AGGCTGAAGC CGAGGCCGAG GCACCTGCAA CCGAAGAGGC TGCAGAGTAG
 
Protein sequence
MKQGIHPEYV ECTVRCTCGN TWTTRATVPE MRLDLCDKCH PFYTGQQKLV DTGGRVQRFA 
DKFGGAANAT LEAAKAAKEA KAAKAAEQEA ARKAAAEAKA AEKAKRAAEF AKNAPVAEPE
PEAEAEAEAE APATEEAAE