| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0113 |
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| Symbol | |
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| ID | 8412956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 127883 |
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| End bp | 128665 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645021680 |
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| Product | putative transcriptional acitvator, Baf family |
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| Protein accession | YP_003179140 |
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| Protein GI | 257783923 |
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| COG category | [K] Transcription |
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| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
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| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.164132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTTTAT CGATTGATGT AGGTAACACG CAAACTGCCA TTGGTTTATT TGACAATGAG
GGCACTATGG TGCGTGGTTG GAGAATGCCC ACCGATCAAA GCGATACCTC TGATATTCTG
CACGGACGCC TTTTTACGTT CTTCCAGAAA GATGGTTTGA ATCTTGATGA CATCGAAGCT
GGTGGACTTT CCTGCGTAGT TCCTATTATC ACACGTGCTT GGAAGCGTTG TTTTGAATTA
CTGCTTAACA AGCCTCTGAC CTCTATTAAT GCACTCTCTA CGGATAAAAT CCGCTTCAAC
ATCCCCCACC CCGAGCTTGT GGGCGCTGAC CGCATAGCAA ATTCTGTTGC TGCAACTGAG
CGCTATGGCT ATCCAGTCAT AGTGGTTGAT TTTGGTACCG CTACCAACTT AGATGTTGTT
GATAAAGACG GTGTATTCCG CGGAGGTGCC ATTTCACCAG GCATTATGAT TTCTGCAAAC
GCCCTGTTTG CACGCGCTGC CAAGCTCTCC AGTATTCCTA TCAAGGCTCC TGAGACCGTC
TTGGGGAATA CTACAGAAAG CGCTGTTCAG GCAGGTATTG TGGTAGGAGC TGCTGCTCAA
GCAGAGGGTT TAGTTACTAG AACGCTCAAA GAGCCTGGCA TTGAGGGCGC AACCGTTATT
GCAACAGGCG GCCTGGCAAA CACCGTCAGC GAAGCAACAG ACATTTTTGA CGTAGTTGAT
CCACAGCTCA CCATGCGTGG TATTTATCTG ATCTGGAAGC AGTCTGTCGA AGTCACTAAA
TAG
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| Protein sequence | MFLSIDVGNT QTAIGLFDNE GTMVRGWRMP TDQSDTSDIL HGRLFTFFQK DGLNLDDIEA
GGLSCVVPII TRAWKRCFEL LLNKPLTSIN ALSTDKIRFN IPHPELVGAD RIANSVAATE
RYGYPVIVVD FGTATNLDVV DKDGVFRGGA ISPGIMISAN ALFARAAKLS SIPIKAPETV
LGNTTESAVQ AGIVVGAAAQ AEGLVTRTLK EPGIEGATVI ATGGLANTVS EATDIFDVVD
PQLTMRGIYL IWKQSVEVTK
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