Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0109 |
Symbol | |
ID | 8412952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 123777 |
End bp | 124589 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 645021676 |
Product | PHP domain protein |
Protein accession | YP_003179136 |
Protein GI | 257783919 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.165533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCATTA CTTGCGATGT TCATACTCAC AGCCTGTACT CGAGGCATGC CTATTCAACC GTTGAGGAGA ACGTCCGCGT GGCCGCTGAG CGTGGCTTTG AGCTGCTTGG AGTCACTGAT CACTTTTCGT CCATGTTGTA CGACCAGCAG ACCATCAAGA ATTTCCAGTT CTTTATGAAC ACTGCAATTT GGCCAGAAAC ATGGCACGGT GTAAGACTTC TTCATGGTAC TGAGGCTGAT ATTGTTGACC TTGAGGGCAA TCTGTTTGCC TACGACATTA CGTTTGATCA GGGTATTAAT GGTGACAAAC TTCGCCAACC TCATATTCTT GGCGAGCACA TCCTGGCAAC CTGTGATTAC GTTGTTGCAA GTATTCACAG CAAGCAATGG GCAGCTGGTG CCTCACAGAA ACAAATTACT CAGATGTATG TAAATGCGCT GGATAATCCA CATGTTTTGA TTCTTGGTCA CCTTGGCCGT AGTGGTTTAG ATTTTGATAT TCCAGCGCTT GTTCGTGAAT GTCGTGATCG CGGTAAGCTT ATCGAGATGA ACGAAGCCAC ACATGACGAG GGCCAACGTG AGGTTGCTAT TAAGCGTTGT CGCGTGATTG CAGAGACTTG CGCGGAGCTG GGATGCAAGA TTTCCTTTGG CTCAGATGCT CACATTGCAA CTCGTATTGC TGATGCACAC TCTGTCATTA AGCAGCTAGA AGAAATTGAC TTCCCTGAGG AACTTATGGC TTGTCGCGAT GCTCAGACGT TTTTGGACAC CATTGCTAAT GCAAAGATTC CAGCCTCTAA GCAGGGATAT TAA
|
Protein sequence | MRITCDVHTH SLYSRHAYST VEENVRVAAE RGFELLGVTD HFSSMLYDQQ TIKNFQFFMN TAIWPETWHG VRLLHGTEAD IVDLEGNLFA YDITFDQGIN GDKLRQPHIL GEHILATCDY VVASIHSKQW AAGASQKQIT QMYVNALDNP HVLILGHLGR SGLDFDIPAL VRECRDRGKL IEMNEATHDE GQREVAIKRC RVIAETCAEL GCKISFGSDA HIATRIADAH SVIKQLEEID FPEELMACRD AQTFLDTIAN AKIPASKQGY
|
| |