| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0108 |
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| Symbol | |
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| ID | 8412951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 122006 |
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| End bp | 123190 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645021675 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_003179135 |
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| Protein GI | 257783918 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.301084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAATC AGACAAGTCT TGCATACGGA ACAGAAAAGT CTGCAATCCG TGAGATTGCG
GGTTACGCAG CGCAGCGCCG TGCTGAGATT GGCGCTCAGA ATGTGTTTGA TTTCTCGATT
GGTAACCCTT CAGTCCCTGC TCCCGAGGCT GTTCGTACCT CTATCGAGGC TGCTATGCAG
CTGCCTCCAC AGCAGGTTCA CAGTTACACT CCTGCAGTTG GCATTCCTCA GGCTAGGGAG
GCAATTGCTG CGTCGTTACG ACGTCGTTTT GGAAACTACG CAGCTCAGGC GGATGACCTT
ATTTTGACTT GTGGAGCCGC GGCTTCTGTT TCTATGGCAA TCAATTCTAT TGTTTCCCCA
GGTGAAGAGG TTATTGTCAT TGCACCATAC TTCCCGGAAT ATCGCGTATG GATTGACCAT
GCTCAAGCTA CTTGTGTTGA GGTTTTAGCT GATAAGAAAA CCTTCCAAAT TGATATTGAT
GCTGTTTGTT CAGCTATTAC GCCTAAGACT CGTGCGGTGA TTATCAACTC TCCAAATAAT
CCTGTTGGCG CTGTGTACAC TAGGGAAAAC CTGGATGCAT TTGCTGATAT GCTCCGCAAA
CGCTCTTCTG AGTTGGGTAC TGACATCTAC GTTATTTCAG ATGAGCCTTA CCGCGAGATT
GTCTTTGGTG ATATTGAGGT TCCTTGGGTT CCAGATGTCT ACGAACGCAC CATTGTGTGC
TACTCCTATT CAAAGTCCCT CTCGCTTCCT GGCGAGCGTA TTGGTTGGGT GTTGGTACCT
GCGTCTAATC CAGAGCAGAA GGAGATTTAC GCAGCTTGTG CGGGCGCTGC TCGTTTGCTG
GGCTTTGTGT GCGCGCCAGC CCTTTTCCAG CGCGTTATTA TTGACTGTGT TGATGAGCCA
GCAGATGTTG AGGCTTATGC AAAGAATCGA GAAGTTCTGA CTGATGGTTT GACCAAGCTT
GATTACGAGT ACATCCAGCC TGATGGCGCA TTCTATCTGT GGGTTCGTGC TCCTGGTGGA
GATGCTCAGG CATTCTGTAA TGTTGCTAAG CAGTTTGAAC TGCTCCCTGT TCCATCTGAT
TCATTCGGTT GCCCAGGATG GCTGCGTGTG AGCTACTGTG TTGCATATCA GACTTGCGTT
GATTCACTTG CTGCCTGGGA AAAGGCACTT GCTGCAATGA AATAA
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| Protein sequence | MVNQTSLAYG TEKSAIREIA GYAAQRRAEI GAQNVFDFSI GNPSVPAPEA VRTSIEAAMQ
LPPQQVHSYT PAVGIPQARE AIAASLRRRF GNYAAQADDL ILTCGAAASV SMAINSIVSP
GEEVIVIAPY FPEYRVWIDH AQATCVEVLA DKKTFQIDID AVCSAITPKT RAVIINSPNN
PVGAVYTREN LDAFADMLRK RSSELGTDIY VISDEPYREI VFGDIEVPWV PDVYERTIVC
YSYSKSLSLP GERIGWVLVP ASNPEQKEIY AACAGAARLL GFVCAPALFQ RVIIDCVDEP
ADVEAYAKNR EVLTDGLTKL DYEYIQPDGA FYLWVRAPGG DAQAFCNVAK QFELLPVPSD
SFGCPGWLRV SYCVAYQTCV DSLAAWEKAL AAMK
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