| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0092 |
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| Symbol | |
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| ID | 8412935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 100639 |
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| End bp | 101307 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021659 |
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| Product | Transaldolase |
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| Protein accession | YP_003179119 |
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| Protein GI | 257783902 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0176] Transaldolase |
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| TIGRFAM ID | [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGTTTA TTCTGGATAC AGCTGATATC GACGCGGTTA AGCAACTTGA TGAGCTTTTG
ACCATCGATG GAGTTACCAC TAACCCTTCA ATTATCACTA GAAGTGGTAA GCAGCCCGAG
CAGGTAATCA AAGAGTTTGT GGAGTATCTA CTTCCTGACC AGAAATTCTT TGTTCAGGTT
GTTTCGACTG ACTATCAGAA GATGTTGGAA GAGGCTCGCT ATATTTGTGG CCTCCGTCCC
GAGAATACCT ACGTGAAGAT TCCTGTGACT CGCAATGGTT ACAAGGCAAT TAAGCAGCTC
AAGTCCGAGG GTCTTGGTGT TCTTGCAACC GCTATTTATT CCGCTGACGA GGCATTCCTA
GCAGCTATGA ACGGCGCAGA TTACCTCGCC CCTTACGTTA ACCGTATGTG CAACTATGGT
GACGGTATTG GCCAAGTTTT TGATCTGATG CAAATGCTTG AGACTCATGG ACTGAATTCT
AAGATTCTTG CTGCATCATT TAAGAATACT GAGCAGGTTC ATGCACTTAT TTCTGCAGGT
ATCGATGCAG TTACACTTCC ACCTGATATT GTCTATACCA TGATGGATCA TCCAGGCACA
AAGATTGCTG TTGATGAGTT TTCCGTCGCA TGGCGCGAGG CTTACAGCAG GGATACATTG
CTGGAGTAA
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| Protein sequence | MEFILDTADI DAVKQLDELL TIDGVTTNPS IITRSGKQPE QVIKEFVEYL LPDQKFFVQV
VSTDYQKMLE EARYICGLRP ENTYVKIPVT RNGYKAIKQL KSEGLGVLAT AIYSADEAFL
AAMNGADYLA PYVNRMCNYG DGIGQVFDLM QMLETHGLNS KILAASFKNT EQVHALISAG
IDAVTLPPDI VYTMMDHPGT KIAVDEFSVA WREAYSRDTL LE
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